RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
UBFD1-201ENST00000395878 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
UBFD1-201ENST00000395878 PRM1P04553 51 aa5.21□□□□□ -1.58
UBFD1-201ENST00000395878 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
UBFD1-201ENST00000395878 MT4P47944 62 aa5.18□□□□□ -1.58
UBFD1-201ENST00000395878 UBR4Q5T4S7 5183 aa5.16□□□□□ -1.58
UBFD1-201ENST00000395878 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.58
UBFD1-201ENST00000395878 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
UBFD1-201ENST00000395878 MT1AP04731 61 aa5.09□□□□□ -1.59
UBFD1-201ENST00000395878 RNF213Q63HN8 5207 aa5.09□□□□□ -1.59
UBFD1-201ENST00000395878 FSIP2Q5CZC0 6907 aa5.09□□□□□ -1.6
UBFD1-201ENST00000395878 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
UBFD1-201ENST00000395878 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
UBFD1-201ENST00000395878 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
UBFD1-201ENST00000395878 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
UBFD1-201ENST00000395878 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
UBFD1-201ENST00000395878 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
UBFD1-201ENST00000395878 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
UBFD1-201ENST00000395878 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
UBFD1-201ENST00000395878 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
UBFD1-201ENST00000395878 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
UBFD1-201ENST00000395878 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
UBFD1-201ENST00000395878 MUC2Q02817 5179 aa4.79□□□□□ -1.64
UBFD1-201ENST00000395878 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
UBFD1-201ENST00000395878 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
UBFD1-201ENST00000395878 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
UBFD1-201ENST00000395878 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
UBFD1-201ENST00000395878 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
UBFD1-201ENST00000395878 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
UBFD1-201ENST00000395878 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
UBFD1-201ENST00000395878 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.66
UBFD1-201ENST00000395878 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
UBFD1-201ENST00000395878 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
UBFD1-201ENST00000395878 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
UBFD1-201ENST00000395878 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
UBFD1-201ENST00000395878 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
UBFD1-201ENST00000395878 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
UBFD1-201ENST00000395878 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
UBFD1-201ENST00000395878 USH2AO75445 5202 aa4.32□□□□□ -1.72
UBFD1-201ENST00000395878 KMT2DO14686 5537 aa4.26□□□□□ -1.73
UBFD1-201ENST00000395878 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
UBFD1-201ENST00000395878 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
UBFD1-201ENST00000395878 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
UBFD1-201ENST00000395878 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
UBFD1-201ENST00000395878 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
UBFD1-201ENST00000395878 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
UBFD1-201ENST00000395878 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
UBFD1-201ENST00000395878 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
UBFD1-201ENST00000395878 NEBP20929 6669 aa3.91□□□□□ -1.78
UBFD1-201ENST00000395878 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
UBFD1-201ENST00000395878 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
UBFD1-201ENST00000395878 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
UBFD1-201ENST00000395878 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
UBFD1-201ENST00000395878 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
UBFD1-201ENST00000395878 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
UBFD1-201ENST00000395878 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
UBFD1-201ENST00000395878 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
UBFD1-201ENST00000395878 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
UBFD1-201ENST00000395878 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
UBFD1-201ENST00000395878 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
UBFD1-201ENST00000395878 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
UBFD1-201ENST00000395878 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
UBFD1-201ENST00000395878 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
UBFD1-201ENST00000395878 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
UBFD1-201ENST00000395878 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.96
UBFD1-201ENST00000395878 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
UBFD1-201ENST00000395878 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
UBFD1-201ENST00000395878 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
UBFD1-201ENST00000395878 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
UBFD1-201ENST00000395878 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
UBFD1-201ENST00000395878 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
UBFD1-201ENST00000395878 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
UBFD1-201ENST00000395878 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
UBFD1-201ENST00000395878 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
UBFD1-201ENST00000395878 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
UBFD1-201ENST00000395878 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
UBFD1-201ENST00000395878 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms