RNA–Protein interactions for RNA: ENST00000394120.6

DYSF-202, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-202ENST00000394120 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
DYSF-202ENST00000394120 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
DYSF-202ENST00000394120 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
DYSF-202ENST00000394120 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
DYSF-202ENST00000394120 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
DYSF-202ENST00000394120 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
DYSF-202ENST00000394120 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
DYSF-202ENST00000394120 PRM1P04553 51 aa3.97□□□□□ -1.77
DYSF-202ENST00000394120 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
DYSF-202ENST00000394120 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
DYSF-202ENST00000394120 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
DYSF-202ENST00000394120 MT3P25713 68 aa3.83□□□□□ -1.8
DYSF-202ENST00000394120 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
DYSF-202ENST00000394120 FSIP2Q5CZC0 6907 aa3.77□□□□□ -1.81
DYSF-202ENST00000394120 MUC2Q02817 5179 aa3.76□□□□□ -1.81
DYSF-202ENST00000394120 MT1AP04731 61 aa3.76□□□□□ -1.81
DYSF-202ENST00000394120 LCE2DQ5TA82 110 aaPredicted RBP3.73□□□□□ -1.81
DYSF-202ENST00000394120 MT4P47944 62 aa3.73□□□□□ -1.81
DYSF-202ENST00000394120 LCE2AQ5TA79 106 aaPredicted RBP3.71□□□□□ -1.82
DYSF-202ENST00000394120 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
DYSF-202ENST00000394120 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
DYSF-202ENST00000394120 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
DYSF-202ENST00000394120 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
DYSF-202ENST00000394120 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.85
DYSF-202ENST00000394120 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.85
DYSF-202ENST00000394120 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
DYSF-202ENST00000394120 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
DYSF-202ENST00000394120 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
DYSF-202ENST00000394120 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
DYSF-202ENST00000394120 USH2AO75445 5202 aa3.49□□□□□ -1.85
DYSF-202ENST00000394120 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
DYSF-202ENST00000394120 KMT2DO14686 5537 aa3.39□□□□□ -1.87
DYSF-202ENST00000394120 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
DYSF-202ENST00000394120 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
DYSF-202ENST00000394120 KRTAP9-6A0A140TA67 174 aa3.33□□□□□ -1.88
DYSF-202ENST00000394120 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
DYSF-202ENST00000394120 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
DYSF-202ENST00000394120 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
DYSF-202ENST00000394120 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
DYSF-202ENST00000394120 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
DYSF-202ENST00000394120 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
DYSF-202ENST00000394120 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
DYSF-202ENST00000394120 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
DYSF-202ENST00000394120 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
DYSF-202ENST00000394120 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
DYSF-202ENST00000394120 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
DYSF-202ENST00000394120 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
DYSF-202ENST00000394120 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
DYSF-202ENST00000394120 KRTAP5-9P26371 169 aa2.9□□□□□ -1.94
DYSF-202ENST00000394120 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
DYSF-202ENST00000394120 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
DYSF-202ENST00000394120 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.96
DYSF-202ENST00000394120 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
DYSF-202ENST00000394120 NEBP20929 6669 aa2.75□□□□□ -1.97
DYSF-202ENST00000394120 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
DYSF-202ENST00000394120 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
DYSF-202ENST00000394120 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
DYSF-202ENST00000394120 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
DYSF-202ENST00000394120 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
DYSF-202ENST00000394120 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
DYSF-202ENST00000394120 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
DYSF-202ENST00000394120 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
DYSF-202ENST00000394120 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
DYSF-202ENST00000394120 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
DYSF-202ENST00000394120 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
DYSF-202ENST00000394120 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
DYSF-202ENST00000394120 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
DYSF-202ENST00000394120 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
DYSF-202ENST00000394120 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
DYSF-202ENST00000394120 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
DYSF-202ENST00000394120 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
DYSF-202ENST00000394120 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
DYSF-202ENST00000394120 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
DYSF-202ENST00000394120 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
DYSF-202ENST00000394120 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
DYSF-202ENST00000394120 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
DYSF-202ENST00000394120 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 84.4 ms