RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 MT1MQ8N339 61 aa2.68□□□□□ -1.98
GABRA1-202ENST00000393943 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
GABRA1-202ENST00000393943 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.99
GABRA1-202ENST00000393943 RNF213Q63HN8 5207 aa2.65□□□□□ -1.99
GABRA1-202ENST00000393943 FSIP2Q5CZC0 6907 aa2.61□□□□□ -1.99
GABRA1-202ENST00000393943 MT1AP04731 61 aa2.61□□□□□ -1.99
GABRA1-202ENST00000393943 UBR4Q5T4S7 5183 aa2.56□□□□□ -2
GABRA1-202ENST00000393943 LOC100996750A0A140TA64 210 aa2.55□□□□□ -2
GABRA1-202ENST00000393943 MUC2Q02817 5179 aa2.53□□□□□ -2
GABRA1-202ENST00000393943 PRM1P04553 51 aa2.52□□□□□ -2.01
GABRA1-202ENST00000393943 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
GABRA1-202ENST00000393943 SPRR2EP22531 72 aa2.46□□□□□ -2.02
GABRA1-202ENST00000393943 SPRR2BP35325 72 aa2.46□□□□□ -2.02
GABRA1-202ENST00000393943 SPRR2AP35326 72 aa2.46□□□□□ -2.02
GABRA1-202ENST00000393943 MT3P25713 68 aa2.45□□□□□ -2.02
GABRA1-202ENST00000393943 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
GABRA1-202ENST00000393943 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
GABRA1-202ENST00000393943 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
GABRA1-202ENST00000393943 SPRR2DP22532 72 aa2.38□□□□□ -2.03
GABRA1-202ENST00000393943 KRTAP9-2Q9BYQ4 174 aa2.36□□□□□ -2.03
GABRA1-202ENST00000393943 KRTAP6-1Q3LI64 71 aa2.36□□□□□ -2.03
GABRA1-202ENST00000393943 KRTAP4-9Q9BYQ8 210 aa2.35□□□□□ -2.03
GABRA1-202ENST00000393943 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
GABRA1-202ENST00000393943 LCE1AQ5T7P2 110 aa2.32□□□□□ -2.04
GABRA1-202ENST00000393943 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
GABRA1-202ENST00000393943 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
GABRA1-202ENST00000393943 KRTAP9-7A8MTY7 169 aa2.28□□□□□ -2.04
GABRA1-202ENST00000393943 USH2AO75445 5202 aa2.28□□□□□ -2.04
GABRA1-202ENST00000393943 KRTAP9-6A0A140TA67 174 aa2.27□□□□□ -2.05
GABRA1-202ENST00000393943 KMT2DO14686 5537 aa2.19□□□□□ -2.06
GABRA1-202ENST00000393943 KRTAP2-2Q9BYT5 123 aa2.18□□□□□ -2.06
GABRA1-202ENST00000393943 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
GABRA1-202ENST00000393943 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.06
GABRA1-202ENST00000393943 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
GABRA1-202ENST00000393943 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
GABRA1-202ENST00000393943 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
GABRA1-202ENST00000393943 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
GABRA1-202ENST00000393943 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
GABRA1-202ENST00000393943 LCE4AQ5TA78 99 aa2.06□□□□□ -2.08
GABRA1-202ENST00000393943 FCGBPQ9Y6R7 5405 aaPredicted RBP2.05□□□□□ -2.08
GABRA1-202ENST00000393943 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
GABRA1-202ENST00000393943 LCE1DQ5T752 114 aa2.02□□□□□ -2.09
GABRA1-202ENST00000393943 MT4P47944 62 aa2□□□□□ -2.09
GABRA1-202ENST00000393943 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.99□□□□□ -2.09
GABRA1-202ENST00000393943 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
GABRA1-202ENST00000393943 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
GABRA1-202ENST00000393943 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
GABRA1-202ENST00000393943 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
GABRA1-202ENST00000393943 NEBP20929 6669 aa1.85□□□□□ -2.11
GABRA1-202ENST00000393943 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
GABRA1-202ENST00000393943 MDN1Q9NU22 5596 aa1.84□□□□□ -2.11
GABRA1-202ENST00000393943 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
GABRA1-202ENST00000393943 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
GABRA1-202ENST00000393943 KRTAP4-11Q9BYQ6 195 aa1.81□□□□□ -2.12
GABRA1-202ENST00000393943 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
GABRA1-202ENST00000393943 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
GABRA1-202ENST00000393943 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
GABRA1-202ENST00000393943 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
GABRA1-202ENST00000393943 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
GABRA1-202ENST00000393943 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
GABRA1-202ENST00000393943 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.14
GABRA1-202ENST00000393943 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
GABRA1-202ENST00000393943 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
GABRA1-202ENST00000393943 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
GABRA1-202ENST00000393943 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
GABRA1-202ENST00000393943 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
GABRA1-202ENST00000393943 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
GABRA1-202ENST00000393943 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
GABRA1-202ENST00000393943 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
GABRA1-202ENST00000393943 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
GABRA1-202ENST00000393943 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
GABRA1-202ENST00000393943 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
GABRA1-202ENST00000393943 KRTAP5-11Q6L8G4 156 aa1.39□□□□□ -2.19
GABRA1-202ENST00000393943 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
GABRA1-202ENST00000393943 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
GABRA1-202ENST00000393943 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
GABRA1-202ENST00000393943 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 41.3 ms