RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 MT1MQ8N339 61 aa2.27□□□□□ -2.05
DDX60-201ENST00000393743 LCE2AQ5TA79 106 aaPredicted RBP2.23□□□□□ -2.05
DDX60-201ENST00000393743 RNF213Q63HN8 5207 aa2.21□□□□□ -2.06
DDX60-201ENST00000393743 LPAP08519 4548 aa2.2□□□□□ -2.06
DDX60-201ENST00000393743 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
DDX60-201ENST00000393743 MT4P47944 62 aa2.18□□□□□ -2.06
DDX60-201ENST00000393743 HMCN2Q8NDA2 5059 aa2.18□□□□□ -2.06
DDX60-201ENST00000393743 MT1AP04731 61 aa2.18□□□□□ -2.06
DDX60-201ENST00000393743 LOC100996750A0A140TA64 210 aa2.17□□□□□ -2.06
DDX60-201ENST00000393743 KRTAP4-6Q9BYQ5 205 aa2.17□□□□□ -2.06
DDX60-201ENST00000393743 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
DDX60-201ENST00000393743 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.06
DDX60-201ENST00000393743 KRTAP4-7Q9BYR0 210 aa2.15□□□□□ -2.07
DDX60-201ENST00000393743 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
DDX60-201ENST00000393743 UBR4Q5T4S7 5183 aa2.14□□□□□ -2.07
DDX60-201ENST00000393743 KRTAP9-7A8MTY7 169 aa2.13□□□□□ -2.07
DDX60-201ENST00000393743 LCE1DQ5T752 114 aa2.11□□□□□ -2.07
DDX60-201ENST00000393743 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
DDX60-201ENST00000393743 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
DDX60-201ENST00000393743 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
DDX60-201ENST00000393743 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
DDX60-201ENST00000393743 LCE4AQ5TA78 99 aa2.09□□□□□ -2.07
DDX60-201ENST00000393743 PRM1P04553 51 aa2.08□□□□□ -2.08
DDX60-201ENST00000393743 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
DDX60-201ENST00000393743 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
DDX60-201ENST00000393743 KRTAP2-2Q9BYT5 123 aa2.03□□□□□ -2.08
DDX60-201ENST00000393743 LCE5AQ5TCM9 118 aa2.02□□□□□ -2.09
DDX60-201ENST00000393743 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
DDX60-201ENST00000393743 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.01□□□□□ -2.09
DDX60-201ENST00000393743 KRTAP9-4Q9BYQ2 154 aa1.98□□□□□ -2.09
DDX60-201ENST00000393743 MUC2Q02817 5179 aa1.96□□□□□ -2.1
DDX60-201ENST00000393743 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
DDX60-201ENST00000393743 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
DDX60-201ENST00000393743 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
DDX60-201ENST00000393743 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
DDX60-201ENST00000393743 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
DDX60-201ENST00000393743 USH2AO75445 5202 aa1.88□□□□□ -2.11
DDX60-201ENST00000393743 KRTAP4-9Q9BYQ8 210 aa1.85□□□□□ -2.11
DDX60-201ENST00000393743 LCE1CQ5T751 118 aa1.84□□□□□ -2.12
DDX60-201ENST00000393743 LCE1EQ5T753 118 aa1.84□□□□□ -2.12
DDX60-201ENST00000393743 LCE1FQ5T754 118 aa1.84□□□□□ -2.12
DDX60-201ENST00000393743 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.12
DDX60-201ENST00000393743 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
DDX60-201ENST00000393743 KRTAP9-9Q9BYP9 154 aa1.8□□□□□ -2.12
DDX60-201ENST00000393743 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
DDX60-201ENST00000393743 KRTAP5-9P26371 169 aa1.79□□□□□ -2.12
DDX60-201ENST00000393743 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
DDX60-201ENST00000393743 NEBP20929 6669 aa1.75□□□□□ -2.13
DDX60-201ENST00000393743 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.13
DDX60-201ENST00000393743 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
DDX60-201ENST00000393743 MACF1Q9UPN3 7388 aaKnown RBP1.68□□□□□ -2.14
DDX60-201ENST00000393743 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
DDX60-201ENST00000393743 KMT2DO14686 5537 aa1.64□□□□□ -2.15
DDX60-201ENST00000393743 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
DDX60-201ENST00000393743 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
DDX60-201ENST00000393743 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
DDX60-201ENST00000393743 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
DDX60-201ENST00000393743 KRTAP5-3Q6L8H2 238 aa1.59□□□□□ -2.15
DDX60-201ENST00000393743 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
DDX60-201ENST00000393743 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
DDX60-201ENST00000393743 KRTAP5-5Q701N2 237 aaPredicted RBP1.56□□□□□ -2.16
DDX60-201ENST00000393743 KRTAP4-11Q9BYQ6 195 aa1.49□□□□□ -2.17
DDX60-201ENST00000393743 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
DDX60-201ENST00000393743 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
DDX60-201ENST00000393743 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
DDX60-201ENST00000393743 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
DDX60-201ENST00000393743 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
DDX60-201ENST00000393743 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
DDX60-201ENST00000393743 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
DDX60-201ENST00000393743 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.21
DDX60-201ENST00000393743 KRTAP5-8O75690 187 aa1.19□□□□□ -2.22
DDX60-201ENST00000393743 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
DDX60-201ENST00000393743 KRTAP5-11Q6L8G4 156 aa1.13□□□□□ -2.23
DDX60-201ENST00000393743 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
DDX60-201ENST00000393743 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
DDX60-201ENST00000393743 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
DDX60-201ENST00000393743 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 228 ms