RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
CIT-202ENST00000392520 LPAP08519 4548 aa4.38□□□□□ -1.71
CIT-202ENST00000392520 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
CIT-202ENST00000392520 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
CIT-202ENST00000392520 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
CIT-202ENST00000392520 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
CIT-202ENST00000392520 MT1AP04731 61 aa4.33□□□□□ -1.72
CIT-202ENST00000392520 MT4P47944 62 aa4.31□□□□□ -1.72
CIT-202ENST00000392520 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
CIT-202ENST00000392520 ABCA13Q86UQ4 5058 aa4.3□□□□□ -1.72
CIT-202ENST00000392520 PKHD1P08F94 4074 aa4.29□□□□□ -1.72
CIT-202ENST00000392520 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
CIT-202ENST00000392520 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
CIT-202ENST00000392520 TNXBP22105 4242 aa4.21□□□□□ -1.74
CIT-202ENST00000392520 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
CIT-202ENST00000392520 RNF213Q63HN8 5207 aa4.15□□□□□ -1.75
CIT-202ENST00000392520 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
CIT-202ENST00000392520 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
CIT-202ENST00000392520 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
CIT-202ENST00000392520 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
CIT-202ENST00000392520 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
CIT-202ENST00000392520 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
CIT-202ENST00000392520 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
CIT-202ENST00000392520 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
CIT-202ENST00000392520 MUC2Q02817 5179 aa4□□□□□ -1.77
CIT-202ENST00000392520 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
CIT-202ENST00000392520 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
CIT-202ENST00000392520 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.77
CIT-202ENST00000392520 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
CIT-202ENST00000392520 KRTAP9-7A8MTY7 169 aa3.86□□□□□ -1.79
CIT-202ENST00000392520 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
CIT-202ENST00000392520 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
CIT-202ENST00000392520 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
CIT-202ENST00000392520 KRTAP9-6A0A140TA67 174 aa3.75□□□□□ -1.81
CIT-202ENST00000392520 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
CIT-202ENST00000392520 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
CIT-202ENST00000392520 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
CIT-202ENST00000392520 USH2AO75445 5202 aa3.65□□□□□ -1.82
CIT-202ENST00000392520 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
CIT-202ENST00000392520 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
CIT-202ENST00000392520 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
CIT-202ENST00000392520 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
CIT-202ENST00000392520 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
CIT-202ENST00000392520 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
CIT-202ENST00000392520 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
CIT-202ENST00000392520 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
CIT-202ENST00000392520 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
CIT-202ENST00000392520 KMT2DO14686 5537 aa3.24□□□□□ -1.89
CIT-202ENST00000392520 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
CIT-202ENST00000392520 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
CIT-202ENST00000392520 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
CIT-202ENST00000392520 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
CIT-202ENST00000392520 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
CIT-202ENST00000392520 NEBP20929 6669 aa3.12□□□□□ -1.91
CIT-202ENST00000392520 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
CIT-202ENST00000392520 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
CIT-202ENST00000392520 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.93
CIT-202ENST00000392520 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
CIT-202ENST00000392520 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
CIT-202ENST00000392520 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
CIT-202ENST00000392520 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
CIT-202ENST00000392520 MUC5ACP98088 5654 aa2.65□□□□□ -1.98
CIT-202ENST00000392520 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
CIT-202ENST00000392520 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
CIT-202ENST00000392520 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
CIT-202ENST00000392520 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
CIT-202ENST00000392520 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
CIT-202ENST00000392520 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
CIT-202ENST00000392520 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
CIT-202ENST00000392520 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
CIT-202ENST00000392520 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
CIT-202ENST00000392520 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
CIT-202ENST00000392520 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
CIT-202ENST00000392520 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
CIT-202ENST00000392520 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CIT-202ENST00000392520 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
CIT-202ENST00000392520 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
CIT-202ENST00000392520 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 131.2 ms