RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
CIT-202ENST00000392520 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
CIT-202ENST00000392520 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
CIT-202ENST00000392520 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
CIT-202ENST00000392520 SHROOM4Q9ULL8 1493 aa23.48■■□□□ 1.35
CIT-202ENST00000392520 EHMT2Q96KQ7 1210 aa23.34■■□□□ 1.33
CIT-202ENST00000392520 APLP2Q06481 763 aa23.21■■□□□ 1.31
CIT-202ENST00000392520 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
CIT-202ENST00000392520 CENPBP07199 599 aaPredicted RBP23.05■■□□□ 1.28
CIT-202ENST00000392520 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
CIT-202ENST00000392520 ERICH6Q7L0X2 663 aa22.89■■□□□ 1.26
CIT-202ENST00000392520 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
CIT-202ENST00000392520 MYT1Q01538 1121 aa22.84■■□□□ 1.25
CIT-202ENST00000392520 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
CIT-202ENST00000392520 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
CIT-202ENST00000392520 NEFLP07196 543 aa22.45■■□□□ 1.18
CIT-202ENST00000392520 TRIM41Q8WV44 630 aa22.42■■□□□ 1.18
CIT-202ENST00000392520 YTHDC1Q96MU7 727 aaKnown RBP22.28■■□□□ 1.16
CIT-202ENST00000392520 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
CIT-202ENST00000392520 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
CIT-202ENST00000392520 ATP1B4Q9UN42 357 aaPredicted RBP22.09■■□□□ 1.13
CIT-202ENST00000392520 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
CIT-202ENST00000392520 HRCP23327 699 aa22.07■■□□□ 1.12
CIT-202ENST00000392520 PPARGC1BQ86YN6 1023 aaKnown RBP21.82■■□□□ 1.08
CIT-202ENST00000392520 DAXXQ9UER7 740 aaPredicted RBP21.81■■□□□ 1.08
CIT-202ENST00000392520 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
CIT-202ENST00000392520 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
CIT-202ENST00000392520 ITGAEP38570 1179 aa21.48■■□□□ 1.03
CIT-202ENST00000392520 RTL5Q5HYW3 569 aaPredicted RBP21.46■■□□□ 1.03
CIT-202ENST00000392520 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.02
CIT-202ENST00000392520 DIEXFQ68CQ4 756 aaKnown RBP21.45■■□□□ 1.02
CIT-202ENST00000392520 POLR3GLQ9BT43 218 aa21.45■■□□□ 1.02
CIT-202ENST00000392520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.29■■□□□ 1
CIT-202ENST00000392520 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
CIT-202ENST00000392520 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
CIT-202ENST00000392520 CLSPNQ9HAW4 1339 aa21.18■□□□□ 0.98
CIT-202ENST00000392520 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
CIT-202ENST00000392520 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
CIT-202ENST00000392520 CDK11AQ9UQ88 783 aaPredicted RBP21.01■□□□□ 0.95
CIT-202ENST00000392520 BCANQ96GW7 911 aa21■□□□□ 0.95
CIT-202ENST00000392520 ANP32CO43423 234 aa20.94■□□□□ 0.94
CIT-202ENST00000392520 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
CIT-202ENST00000392520 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
CIT-202ENST00000392520 ACIN1Q9UKV3 1341 aaKnown RBP20.88■□□□□ 0.93
CIT-202ENST00000392520 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
CIT-202ENST00000392520 TRIM52Q96A61 297 aa20.83■□□□□ 0.93
CIT-202ENST00000392520 ANP32AP39687 249 aaKnown RBP20.69■□□□□ 0.9
CIT-202ENST00000392520 ZBTB47Q9UFB7 747 aaPredicted RBP20.69■□□□□ 0.9
CIT-202ENST00000392520 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
CIT-202ENST00000392520 CANXP27824 592 aaKnown RBP20.56■□□□□ 0.88
CIT-202ENST00000392520 FKBP8Q14318 412 aa20.44■□□□□ 0.86
CIT-202ENST00000392520 NPM2Q86SE8 214 aaKnown RBP20.43■□□□□ 0.86
CIT-202ENST00000392520 EIF5BO60841 1220 aaKnown RBP20.43■□□□□ 0.86
CIT-202ENST00000392520 NEFMP07197 916 aa20.39■□□□□ 0.86
CIT-202ENST00000392520 ANP32BQ92688 251 aaKnown RBP20.38■□□□□ 0.85
CIT-202ENST00000392520 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
CIT-202ENST00000392520 GLIPR1L2Q4G1C9 344 aa20.32■□□□□ 0.84
CIT-202ENST00000392520 BCL11AQ9H165 835 aa20.3■□□□□ 0.84
CIT-202ENST00000392520 HNRNPUQ00839 825 aaKnown RBP eCLIP20.28■□□□□ 0.84
CIT-202ENST00000392520 UPF2Q9HAU5 1272 aaKnown RBP20.26■□□□□ 0.83
CIT-202ENST00000392520 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
CIT-202ENST00000392520 TONSLQ96HA7 1378 aa20.23■□□□□ 0.83
CIT-202ENST00000392520 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
CIT-202ENST00000392520 SLC24A1O60721 1099 aa20.2■□□□□ 0.82
CIT-202ENST00000392520 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
CIT-202ENST00000392520 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
CIT-202ENST00000392520 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
CIT-202ENST00000392520 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.82
CIT-202ENST00000392520 P3H3Q8IVL6 736 aa20.14■□□□□ 0.81
CIT-202ENST00000392520 SCAF1Q9H7N4 1312 aaKnown RBP20.14■□□□□ 0.81
CIT-202ENST00000392520 NBR1Q14596 966 aa20.11■□□□□ 0.81
CIT-202ENST00000392520 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.06■□□□□ 0.8
CIT-202ENST00000392520 FBLN2P98095 1184 aa20.05■□□□□ 0.8
CIT-202ENST00000392520 ZNF777Q9ULD5 760 aaPredicted RBP20.03■□□□□ 0.8
CIT-202ENST00000392520 TMC1Q8TDI8 760 aa20.03■□□□□ 0.8
CIT-202ENST00000392520 ABCC9O60706 1549 aa20■□□□□ 0.79
CIT-202ENST00000392520 ARID3CA6NKF2 412 aa20■□□□□ 0.79
CIT-202ENST00000392520 MIER1Q8N108 512 aa19.99■□□□□ 0.79
CIT-202ENST00000392520 MRS2Q9HD23 443 aa19.97■□□□□ 0.79
CIT-202ENST00000392520 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
CIT-202ENST00000392520 WDR43Q15061 677 aaKnown RBP eCLIP19.88■□□□□ 0.77
CIT-202ENST00000392520 ARXQ96QS3 562 aa19.88■□□□□ 0.77
CIT-202ENST00000392520 DDRGK1Q96HY6 314 aa19.87■□□□□ 0.77
CIT-202ENST00000392520 ANP32EQ9BTT0 268 aa19.85■□□□□ 0.77
CIT-202ENST00000392520 IRX6P78412 446 aaPredicted RBP19.84■□□□□ 0.77
CIT-202ENST00000392520 BECN1Q14457 450 aa19.81■□□□□ 0.76
CIT-202ENST00000392520 CHGAP10645 457 aaKnown RBP19.78■□□□□ 0.76
CIT-202ENST00000392520 EIF4G2P78344 907 aaKnown RBP eCLIP19.76■□□□□ 0.75
CIT-202ENST00000392520 TRIM44Q96DX7 344 aaPredicted RBP19.76■□□□□ 0.75
CIT-202ENST00000392520 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
CIT-202ENST00000392520 MYH16Q9H6N6 1097 aa19.72■□□□□ 0.75
CIT-202ENST00000392520 STAG3Q9UJ98 1225 aa19.7■□□□□ 0.74
CIT-202ENST00000392520 PPM1GO15355 546 aaPredicted RBP19.7■□□□□ 0.74
CIT-202ENST00000392520 GOLGA6L22H0YM25 854 aa19.69■□□□□ 0.74
CIT-202ENST00000392520 ESF1Q9H501 851 aaKnown RBP19.69■□□□□ 0.74
CIT-202ENST00000392520 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
CIT-202ENST00000392520 ERICH6BQ5W0A0 696 aa19.66■□□□□ 0.74
CIT-202ENST00000392520 KDM2AQ9Y2K7 1162 aa19.65■□□□□ 0.74
CIT-202ENST00000392520 NCLP19338 710 aaKnown RBP19.65■□□□□ 0.74
CIT-202ENST00000392520 TSPY4P0CV99 314 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms