RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 BIRC6Q9NR09 4857 aa3.73□□□□□ -1.81
KCNQ3-201ENST00000388996 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
KCNQ3-201ENST00000388996 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
KCNQ3-201ENST00000388996 PRM1P04553 51 aa3.7□□□□□ -1.82
KCNQ3-201ENST00000388996 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
KCNQ3-201ENST00000388996 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
KCNQ3-201ENST00000388996 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
KCNQ3-201ENST00000388996 MT1AP04731 61 aa3.59□□□□□ -1.83
KCNQ3-201ENST00000388996 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
KCNQ3-201ENST00000388996 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
KCNQ3-201ENST00000388996 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
KCNQ3-201ENST00000388996 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
KCNQ3-201ENST00000388996 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
KCNQ3-201ENST00000388996 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
KCNQ3-201ENST00000388996 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
KCNQ3-201ENST00000388996 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
KCNQ3-201ENST00000388996 LCE2AQ5TA79 106 aaPredicted RBP3.49□□□□□ -1.85
KCNQ3-201ENST00000388996 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
KCNQ3-201ENST00000388996 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
KCNQ3-201ENST00000388996 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
KCNQ3-201ENST00000388996 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
KCNQ3-201ENST00000388996 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
KCNQ3-201ENST00000388996 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
KCNQ3-201ENST00000388996 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
KCNQ3-201ENST00000388996 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
KCNQ3-201ENST00000388996 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
KCNQ3-201ENST00000388996 MUC2Q02817 5179 aa3.3□□□□□ -1.88
KCNQ3-201ENST00000388996 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
KCNQ3-201ENST00000388996 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
KCNQ3-201ENST00000388996 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
KCNQ3-201ENST00000388996 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
KCNQ3-201ENST00000388996 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
KCNQ3-201ENST00000388996 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
KCNQ3-201ENST00000388996 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
KCNQ3-201ENST00000388996 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
KCNQ3-201ENST00000388996 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.9
KCNQ3-201ENST00000388996 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
KCNQ3-201ENST00000388996 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
KCNQ3-201ENST00000388996 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
KCNQ3-201ENST00000388996 USH2AO75445 5202 aa2.96□□□□□ -1.94
KCNQ3-201ENST00000388996 NEBP20929 6669 aa2.85□□□□□ -1.95
KCNQ3-201ENST00000388996 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
KCNQ3-201ENST00000388996 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
KCNQ3-201ENST00000388996 KMT2DO14686 5537 aa2.76□□□□□ -1.97
KCNQ3-201ENST00000388996 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
KCNQ3-201ENST00000388996 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
KCNQ3-201ENST00000388996 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
KCNQ3-201ENST00000388996 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
KCNQ3-201ENST00000388996 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
KCNQ3-201ENST00000388996 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
KCNQ3-201ENST00000388996 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
KCNQ3-201ENST00000388996 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
KCNQ3-201ENST00000388996 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
KCNQ3-201ENST00000388996 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
KCNQ3-201ENST00000388996 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
KCNQ3-201ENST00000388996 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
KCNQ3-201ENST00000388996 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
KCNQ3-201ENST00000388996 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
KCNQ3-201ENST00000388996 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
KCNQ3-201ENST00000388996 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
KCNQ3-201ENST00000388996 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
KCNQ3-201ENST00000388996 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.05
KCNQ3-201ENST00000388996 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
KCNQ3-201ENST00000388996 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
KCNQ3-201ENST00000388996 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
KCNQ3-201ENST00000388996 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
KCNQ3-201ENST00000388996 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
KCNQ3-201ENST00000388996 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
KCNQ3-201ENST00000388996 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
KCNQ3-201ENST00000388996 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
KCNQ3-201ENST00000388996 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
KCNQ3-201ENST00000388996 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
KCNQ3-201ENST00000388996 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
KCNQ3-201ENST00000388996 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
KCNQ3-201ENST00000388996 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
KCNQ3-201ENST00000388996 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
KCNQ3-201ENST00000388996 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 530.7 ms