RNA–Protein interactions for RNA: ENST00000383703.3

LRIG1-202, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRIG1, Length 5,283 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-202ENST00000383703 UBR4Q5T4S7 5183 aa7.14□□□□□ -1.27
LRIG1-202ENST00000383703 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
LRIG1-202ENST00000383703 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
LRIG1-202ENST00000383703 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
LRIG1-202ENST00000383703 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
LRIG1-202ENST00000383703 KRTAP19-7Q3SYF9 63 aa6.99□□□□□ -1.29
LRIG1-202ENST00000383703 FSIP2Q5CZC0 6907 aa6.95□□□□□ -1.3
LRIG1-202ENST00000383703 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
LRIG1-202ENST00000383703 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
LRIG1-202ENST00000383703 SYNE1Q8NF91 8797 aaKnown RBP6.82□□□□□ -1.32
LRIG1-202ENST00000383703 MT3P25713 68 aa6.81□□□□□ -1.32
LRIG1-202ENST00000383703 MUC2Q02817 5179 aa6.68□□□□□ -1.34
LRIG1-202ENST00000383703 MT4P47944 62 aa6.68□□□□□ -1.34
LRIG1-202ENST00000383703 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
LRIG1-202ENST00000383703 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
LRIG1-202ENST00000383703 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
LRIG1-202ENST00000383703 MT1AP04731 61 aa6.62□□□□□ -1.35
LRIG1-202ENST00000383703 PRM1P04553 51 aa6.61□□□□□ -1.35
LRIG1-202ENST00000383703 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
LRIG1-202ENST00000383703 KRTAP4-9Q9BYQ8 210 aa6.47□□□□□ -1.37
LRIG1-202ENST00000383703 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
LRIG1-202ENST00000383703 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
LRIG1-202ENST00000383703 LCE1BQ5T7P3 118 aa6.34□□□□□ -1.39
LRIG1-202ENST00000383703 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
LRIG1-202ENST00000383703 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
LRIG1-202ENST00000383703 LCE1AQ5T7P2 110 aa6.31□□□□□ -1.4
LRIG1-202ENST00000383703 KRTAP6-1Q3LI64 71 aa6.28□□□□□ -1.4
LRIG1-202ENST00000383703 OBSCNQ5VST9 7968 aa6.23□□□□□ -1.41
LRIG1-202ENST00000383703 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
LRIG1-202ENST00000383703 USH2AO75445 5202 aa6.12□□□□□ -1.43
LRIG1-202ENST00000383703 KRTAP6-2Q3LI66 62 aa6.11□□□□□ -1.43
LRIG1-202ENST00000383703 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
LRIG1-202ENST00000383703 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
LRIG1-202ENST00000383703 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
LRIG1-202ENST00000383703 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
LRIG1-202ENST00000383703 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
LRIG1-202ENST00000383703 KMT2DO14686 5537 aa5.89□□□□□ -1.47
LRIG1-202ENST00000383703 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
LRIG1-202ENST00000383703 DSTQ03001 7570 aaKnown RBP5.77□□□□□ -1.48
LRIG1-202ENST00000383703 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
LRIG1-202ENST00000383703 MACF1Q9UPN3 7388 aaKnown RBP5.59□□□□□ -1.52
LRIG1-202ENST00000383703 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
LRIG1-202ENST00000383703 KRTAP5-9P26371 169 aa5.51□□□□□ -1.53
LRIG1-202ENST00000383703 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
LRIG1-202ENST00000383703 NEBP20929 6669 aa5.26□□□□□ -1.57
LRIG1-202ENST00000383703 LCE1CQ5T751 118 aa5.23□□□□□ -1.57
LRIG1-202ENST00000383703 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
LRIG1-202ENST00000383703 LCE1FQ5T754 118 aa5.23□□□□□ -1.57
LRIG1-202ENST00000383703 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
LRIG1-202ENST00000383703 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
LRIG1-202ENST00000383703 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
LRIG1-202ENST00000383703 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
LRIG1-202ENST00000383703 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
LRIG1-202ENST00000383703 MUC19Q7Z5P9 8384 aa4.84□□□□□ -1.63
LRIG1-202ENST00000383703 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
LRIG1-202ENST00000383703 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
LRIG1-202ENST00000383703 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
LRIG1-202ENST00000383703 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
LRIG1-202ENST00000383703 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
LRIG1-202ENST00000383703 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
LRIG1-202ENST00000383703 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
LRIG1-202ENST00000383703 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
LRIG1-202ENST00000383703 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
LRIG1-202ENST00000383703 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
LRIG1-202ENST00000383703 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
LRIG1-202ENST00000383703 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
LRIG1-202ENST00000383703 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
LRIG1-202ENST00000383703 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
LRIG1-202ENST00000383703 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
LRIG1-202ENST00000383703 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
LRIG1-202ENST00000383703 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
LRIG1-202ENST00000383703 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
LRIG1-202ENST00000383703 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
LRIG1-202ENST00000383703 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
LRIG1-202ENST00000383703 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
LRIG1-202ENST00000383703 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
LRIG1-202ENST00000383703 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms