RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 KRTAP4-8Q9BYQ9 185 aa1.3□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP19-7Q3SYF9 63 aa1.29□□□□□ -2.2
PTCD2-202ENST00000380639 MT1BP07438 61 aa1.29□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP4-9Q9BYQ8 210 aa1.29□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP2-2Q9BYT5 123 aa1.29□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP2-1Q9BYU5 128 aa1.29□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.2
PTCD2-202ENST00000380639 LRP1Q07954 4544 aaKnown RBP1.28□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP9-8Q9BYQ0 159 aa1.26□□□□□ -2.21
PTCD2-202ENST00000380639 RNF213Q63HN8 5207 aa1.26□□□□□ -2.21
PTCD2-202ENST00000380639 FAT4Q6V0I7 4981 aa1.26□□□□□ -2.21
PTCD2-202ENST00000380639 KRTAP4-7Q9BYR0 210 aa1.26□□□□□ -2.21
PTCD2-202ENST00000380639 LOC100996750A0A140TA64 210 aa1.25□□□□□ -2.21
PTCD2-202ENST00000380639 KRTAP9-3Q9BYQ3 159 aa1.24□□□□□ -2.21
PTCD2-202ENST00000380639 KRTAP9-7A8MTY7 169 aa1.23□□□□□ -2.21
PTCD2-202ENST00000380639 MUC17Q685J3 4493 aa1.23□□□□□ -2.21
PTCD2-202ENST00000380639 KRTAP4-11Q9BYQ6 195 aa1.22□□□□□ -2.21
PTCD2-202ENST00000380639 LRP2P98164 4655 aa1.22□□□□□ -2.21
PTCD2-202ENST00000380639 MACF1Q9UPN3 7388 aaKnown RBP1.21□□□□□ -2.22
PTCD2-202ENST00000380639 MT1EP04732 61 aa1.21□□□□□ -2.22
PTCD2-202ENST00000380639 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
PTCD2-202ENST00000380639 MT1AP04731 61 aa1.2□□□□□ -2.22
PTCD2-202ENST00000380639 KRTAP9-9Q9BYP9 154 aa1.19□□□□□ -2.22
PTCD2-202ENST00000380639 KRTAP9-6A0A140TA67 174 aa1.18□□□□□ -2.22
PTCD2-202ENST00000380639 MT1MQ8N339 61 aa1.18□□□□□ -2.22
PTCD2-202ENST00000380639 KRTAP9-6A8MVA2 160 aa1.17□□□□□ -2.22
PTCD2-202ENST00000380639 LPAP08519 4548 aa1.17□□□□□ -2.22
PTCD2-202ENST00000380639 KRTAP20-1Q3LI63 56 aa1.16□□□□□ -2.22
PTCD2-202ENST00000380639 KRTAP9-2Q9BYQ4 174 aa1.16□□□□□ -2.22
PTCD2-202ENST00000380639 KRTAP4-3Q9BYR4 195 aa1.15□□□□□ -2.22
PTCD2-202ENST00000380639 KRTAP9-4Q9BYQ2 154 aa1.15□□□□□ -2.23
PTCD2-202ENST00000380639 KRTAP19-2Q3LHN2 52 aa1.12□□□□□ -2.23
PTCD2-202ENST00000380639 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
PTCD2-202ENST00000380639 OBSCNQ5VST9 7968 aa1.09□□□□□ -2.23
PTCD2-202ENST00000380639 USH2AO75445 5202 aa1.09□□□□□ -2.23
PTCD2-202ENST00000380639 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
PTCD2-202ENST00000380639 MUC2Q02817 5179 aa1.06□□□□□ -2.24
PTCD2-202ENST00000380639 FSIP2Q5CZC0 6907 aa1.06□□□□□ -2.24
PTCD2-202ENST00000380639 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
PTCD2-202ENST00000380639 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.24
PTCD2-202ENST00000380639 SYNE1Q8NF91 8797 aaKnown RBP1.03□□□□□ -2.24
PTCD2-202ENST00000380639 SSPOA2VEC9 5147 aa1.03□□□□□ -2.24
PTCD2-202ENST00000380639 KRTAP4-4Q9BYR3 166 aa1.02□□□□□ -2.25
PTCD2-202ENST00000380639 KRTAP6-3Q3LI67 103 aa1□□□□□ -2.25
PTCD2-202ENST00000380639 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.96□□□□□ -2.26
PTCD2-202ENST00000380639 NEBP20929 6669 aa0.95□□□□□ -2.26
PTCD2-202ENST00000380639 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
PTCD2-202ENST00000380639 KMT2DO14686 5537 aa0.93□□□□□ -2.26
PTCD2-202ENST00000380639 KRTAP4-12Q9BQ66 201 aa0.92□□□□□ -2.26
PTCD2-202ENST00000380639 KRTAP4-2Q9BYR5 136 aa0.92□□□□□ -2.26
PTCD2-202ENST00000380639 KRTAP4-6Q9BYQ5 205 aa0.89□□□□□ -2.27
PTCD2-202ENST00000380639 MDN1Q9NU22 5596 aa0.88□□□□□ -2.27
PTCD2-202ENST00000380639 KRTAP5-5Q701N2 237 aaPredicted RBP0.85□□□□□ -2.27
PTCD2-202ENST00000380639 FCGBPQ9Y6R7 5405 aaPredicted RBP0.84□□□□□ -2.27
PTCD2-202ENST00000380639 KRTAP5-9P26371 169 aa0.82□□□□□ -2.28
PTCD2-202ENST00000380639 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
PTCD2-202ENST00000380639 GPR98Q8WXG9 6306 aa0.81□□□□□ -2.28
PTCD2-202ENST00000380639 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
PTCD2-202ENST00000380639 MUC19Q7Z5P9 8384 aa0.78□□□□□ -2.28
PTCD2-202ENST00000380639 KRTAP5-4Q6L8H1 288 aa0.76□□□□□ -2.29
PTCD2-202ENST00000380639 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
PTCD2-202ENST00000380639 HMCN1Q96RW7 5635 aa0.73□□□□□ -2.29
PTCD2-202ENST00000380639 KRTAP5-2Q701N4 177 aa0.73□□□□□ -2.29
PTCD2-202ENST00000380639 MUC5ACP98088 5654 aa0.72□□□□□ -2.29
PTCD2-202ENST00000380639 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.68□□□□□ -2.3
PTCD2-202ENST00000380639 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
PTCD2-202ENST00000380639 KRTAP5-8O75690 187 aa0.67□□□□□ -2.3
PTCD2-202ENST00000380639 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
PTCD2-202ENST00000380639 KRTAP5-3Q6L8H2 238 aa0.65□□□□□ -2.3
PTCD2-202ENST00000380639 KRTAP5-7Q6L8G8 165 aa0.64□□□□□ -2.31
PTCD2-202ENST00000380639 KRTAP5-10Q6L8G5 202 aa0.61□□□□□ -2.31
PTCD2-202ENST00000380639 KRTAP5-11Q6L8G4 156 aa0.6□□□□□ -2.31
PTCD2-202ENST00000380639 KRTAP5-1Q6L8H4 278 aa0.59□□□□□ -2.31
PTCD2-202ENST00000380639 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
PTCD2-202ENST00000380639 KRTAP21-2Q3LI59 83 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms