RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
RAD50-201ENST00000378823 HERC2O95714 4834 aa3.24□□□□□ -1.89
RAD50-201ENST00000378823 RYR2Q92736 4967 aa3.21□□□□□ -1.9
RAD50-201ENST00000378823 KRTAP2-3P0C7H8 128 aa3.21□□□□□ -1.9
RAD50-201ENST00000378823 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.9
RAD50-201ENST00000378823 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
RAD50-201ENST00000378823 MT1AP04731 61 aa3.15□□□□□ -1.91
RAD50-201ENST00000378823 PCLOQ9Y6V0 5065 aa3.15□□□□□ -1.91
RAD50-201ENST00000378823 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.91
RAD50-201ENST00000378823 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
RAD50-201ENST00000378823 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
RAD50-201ENST00000378823 FSIP2Q5CZC0 6907 aa3.09□□□□□ -1.91
RAD50-201ENST00000378823 HERC1Q15751 4861 aa3.05□□□□□ -1.92
RAD50-201ENST00000378823 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
RAD50-201ENST00000378823 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
RAD50-201ENST00000378823 BIRC6Q9NR09 4857 aa3.01□□□□□ -1.93
RAD50-201ENST00000378823 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
RAD50-201ENST00000378823 LCE2AQ5TA79 106 aaPredicted RBP2.99□□□□□ -1.93
RAD50-201ENST00000378823 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.93
RAD50-201ENST00000378823 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
RAD50-201ENST00000378823 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
RAD50-201ENST00000378823 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
RAD50-201ENST00000378823 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
RAD50-201ENST00000378823 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
RAD50-201ENST00000378823 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
RAD50-201ENST00000378823 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
RAD50-201ENST00000378823 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.94
RAD50-201ENST00000378823 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
RAD50-201ENST00000378823 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
RAD50-201ENST00000378823 MUC2Q02817 5179 aa2.83□□□□□ -1.96
RAD50-201ENST00000378823 EPPK1P58107 5090 aaKnown RBP2.82□□□□□ -1.96
RAD50-201ENST00000378823 UBR4Q5T4S7 5183 aa2.81□□□□□ -1.96
RAD50-201ENST00000378823 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
RAD50-201ENST00000378823 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
RAD50-201ENST00000378823 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.75□□□□□ -1.97
RAD50-201ENST00000378823 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
RAD50-201ENST00000378823 ABCA13Q86UQ4 5058 aa2.7□□□□□ -1.98
RAD50-201ENST00000378823 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
RAD50-201ENST00000378823 KMT2DO14686 5537 aa2.68□□□□□ -1.98
RAD50-201ENST00000378823 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
RAD50-201ENST00000378823 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
RAD50-201ENST00000378823 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
RAD50-201ENST00000378823 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
RAD50-201ENST00000378823 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
RAD50-201ENST00000378823 KRTAP4-6Q9BYQ5 205 aa2.43□□□□□ -2.02
RAD50-201ENST00000378823 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
RAD50-201ENST00000378823 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
RAD50-201ENST00000378823 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
RAD50-201ENST00000378823 USH2AO75445 5202 aa2.32□□□□□ -2.04
RAD50-201ENST00000378823 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
RAD50-201ENST00000378823 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
RAD50-201ENST00000378823 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
RAD50-201ENST00000378823 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
RAD50-201ENST00000378823 SSPOA2VEC9 5147 aa2.21□□□□□ -2.06
RAD50-201ENST00000378823 NEBP20929 6669 aa2.2□□□□□ -2.06
RAD50-201ENST00000378823 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
RAD50-201ENST00000378823 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
RAD50-201ENST00000378823 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
RAD50-201ENST00000378823 MDN1Q9NU22 5596 aa2□□□□□ -2.09
RAD50-201ENST00000378823 KRTAP5-3Q6L8H2 238 aa1.86□□□□□ -2.11
RAD50-201ENST00000378823 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
RAD50-201ENST00000378823 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
RAD50-201ENST00000378823 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
RAD50-201ENST00000378823 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
RAD50-201ENST00000378823 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
RAD50-201ENST00000378823 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
RAD50-201ENST00000378823 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
RAD50-201ENST00000378823 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
RAD50-201ENST00000378823 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
RAD50-201ENST00000378823 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
RAD50-201ENST00000378823 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
RAD50-201ENST00000378823 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
RAD50-201ENST00000378823 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
RAD50-201ENST00000378823 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
RAD50-201ENST00000378823 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.2
RAD50-201ENST00000378823 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
RAD50-201ENST00000378823 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms