RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 RNF213Q63HN8 5207 aa3.59□□□□□ -1.83
RPGR-203ENST00000378505 HMCN2Q8NDA2 5059 aa3.58□□□□□ -1.84
RPGR-203ENST00000378505 MT1MQ8N339 61 aa3.57□□□□□ -1.84
RPGR-203ENST00000378505 LCE2AQ5TA79 106 aaPredicted RBP3.55□□□□□ -1.84
RPGR-203ENST00000378505 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
RPGR-203ENST00000378505 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
RPGR-203ENST00000378505 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
RPGR-203ENST00000378505 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
RPGR-203ENST00000378505 MT3P25713 68 aa3.41□□□□□ -1.86
RPGR-203ENST00000378505 MUC2Q02817 5179 aa3.4□□□□□ -1.86
RPGR-203ENST00000378505 LCE2DQ5TA82 110 aaPredicted RBP3.38□□□□□ -1.87
RPGR-203ENST00000378505 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
RPGR-203ENST00000378505 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
RPGR-203ENST00000378505 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
RPGR-203ENST00000378505 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
RPGR-203ENST00000378505 MT1AP04731 61 aa3.32□□□□□ -1.88
RPGR-203ENST00000378505 PRM1P04553 51 aa3.29□□□□□ -1.88
RPGR-203ENST00000378505 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
RPGR-203ENST00000378505 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
RPGR-203ENST00000378505 MT4P47944 62 aa3.24□□□□□ -1.89
RPGR-203ENST00000378505 KRTAP4-9Q9BYQ8 210 aa3.21□□□□□ -1.9
RPGR-203ENST00000378505 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
RPGR-203ENST00000378505 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
RPGR-203ENST00000378505 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
RPGR-203ENST00000378505 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
RPGR-203ENST00000378505 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
RPGR-203ENST00000378505 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
RPGR-203ENST00000378505 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
RPGR-203ENST00000378505 USH2AO75445 5202 aa3.1□□□□□ -1.91
RPGR-203ENST00000378505 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
RPGR-203ENST00000378505 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
RPGR-203ENST00000378505 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
RPGR-203ENST00000378505 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
RPGR-203ENST00000378505 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
RPGR-203ENST00000378505 KRTAP9-7A8MTY7 169 aa2.96□□□□□ -1.94
RPGR-203ENST00000378505 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
RPGR-203ENST00000378505 KMT2DO14686 5537 aa2.93□□□□□ -1.94
RPGR-203ENST00000378505 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
RPGR-203ENST00000378505 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.94
RPGR-203ENST00000378505 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.96
RPGR-203ENST00000378505 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
RPGR-203ENST00000378505 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
RPGR-203ENST00000378505 SSPOA2VEC9 5147 aa2.78□□□□□ -1.96
RPGR-203ENST00000378505 KRTAP5-9P26371 169 aa2.77□□□□□ -1.97
RPGR-203ENST00000378505 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
RPGR-203ENST00000378505 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
RPGR-203ENST00000378505 NEBP20929 6669 aa2.58□□□□□ -2
RPGR-203ENST00000378505 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
RPGR-203ENST00000378505 LCE1CQ5T751 118 aa2.54□□□□□ -2
RPGR-203ENST00000378505 LCE1EQ5T753 118 aa2.54□□□□□ -2
RPGR-203ENST00000378505 LCE1FQ5T754 118 aa2.54□□□□□ -2
RPGR-203ENST00000378505 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
RPGR-203ENST00000378505 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
RPGR-203ENST00000378505 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
RPGR-203ENST00000378505 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
RPGR-203ENST00000378505 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
RPGR-203ENST00000378505 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
RPGR-203ENST00000378505 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
RPGR-203ENST00000378505 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
RPGR-203ENST00000378505 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
RPGR-203ENST00000378505 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
RPGR-203ENST00000378505 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
RPGR-203ENST00000378505 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
RPGR-203ENST00000378505 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
RPGR-203ENST00000378505 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
RPGR-203ENST00000378505 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
RPGR-203ENST00000378505 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
RPGR-203ENST00000378505 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
RPGR-203ENST00000378505 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
RPGR-203ENST00000378505 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
RPGR-203ENST00000378505 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
RPGR-203ENST00000378505 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
RPGR-203ENST00000378505 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
RPGR-203ENST00000378505 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
RPGR-203ENST00000378505 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
RPGR-203ENST00000378505 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
RPGR-203ENST00000378505 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 161.3 ms