RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SPRR2AP35326 72 aa2.71□□□□□ -1.98
PCDH9-202ENST00000377865 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
PCDH9-202ENST00000377865 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
PCDH9-202ENST00000377865 LOC100996750A0A140TA64 210 aa2.66□□□□□ -1.98
PCDH9-202ENST00000377865 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.98
PCDH9-202ENST00000377865 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
PCDH9-202ENST00000377865 SPRR2DP22532 72 aa2.62□□□□□ -1.99
PCDH9-202ENST00000377865 LCE2AQ5TA79 106 aaPredicted RBP2.61□□□□□ -1.99
PCDH9-202ENST00000377865 PRM1P04553 51 aa2.61□□□□□ -1.99
PCDH9-202ENST00000377865 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
PCDH9-202ENST00000377865 MT1AP04731 61 aa2.6□□□□□ -1.99
PCDH9-202ENST00000377865 RNF213Q63HN8 5207 aa2.59□□□□□ -1.99
PCDH9-202ENST00000377865 MT3P25713 68 aa2.54□□□□□ -2
PCDH9-202ENST00000377865 KRTAP4-9Q9BYQ8 210 aa2.45□□□□□ -2.02
PCDH9-202ENST00000377865 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
PCDH9-202ENST00000377865 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
PCDH9-202ENST00000377865 KRTAP9-4Q9BYQ2 154 aa2.38□□□□□ -2.03
PCDH9-202ENST00000377865 MUC2Q02817 5179 aa2.38□□□□□ -2.03
PCDH9-202ENST00000377865 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
PCDH9-202ENST00000377865 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
PCDH9-202ENST00000377865 KRTAP9-2Q9BYQ4 174 aa2.37□□□□□ -2.03
PCDH9-202ENST00000377865 LCE1AQ5T7P2 110 aa2.34□□□□□ -2.03
PCDH9-202ENST00000377865 KRTAP9-7A8MTY7 169 aa2.32□□□□□ -2.04
PCDH9-202ENST00000377865 MT4P47944 62 aa2.24□□□□□ -2.05
PCDH9-202ENST00000377865 LCE1DQ5T752 114 aa2.2□□□□□ -2.06
PCDH9-202ENST00000377865 USH2AO75445 5202 aa2.19□□□□□ -2.06
PCDH9-202ENST00000377865 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
PCDH9-202ENST00000377865 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
PCDH9-202ENST00000377865 KRTAP2-2Q9BYT5 123 aa2.17□□□□□ -2.06
PCDH9-202ENST00000377865 KRTAP4-6Q9BYQ5 205 aa2.15□□□□□ -2.06
PCDH9-202ENST00000377865 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
PCDH9-202ENST00000377865 KMT2DO14686 5537 aa2.13□□□□□ -2.07
PCDH9-202ENST00000377865 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
PCDH9-202ENST00000377865 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
PCDH9-202ENST00000377865 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
PCDH9-202ENST00000377865 KRTAP9-6A0A140TA67 174 aa2.09□□□□□ -2.08
PCDH9-202ENST00000377865 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
PCDH9-202ENST00000377865 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
PCDH9-202ENST00000377865 KRTAP9-1A8MXZ3 250 aaPredicted RBP2□□□□□ -2.09
PCDH9-202ENST00000377865 FSIP2Q5CZC0 6907 aa1.96□□□□□ -2.1
PCDH9-202ENST00000377865 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
PCDH9-202ENST00000377865 OBSCNQ5VST9 7968 aa1.93□□□□□ -2.1
PCDH9-202ENST00000377865 FCGBPQ9Y6R7 5405 aaPredicted RBP1.89□□□□□ -2.11
PCDH9-202ENST00000377865 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
PCDH9-202ENST00000377865 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
PCDH9-202ENST00000377865 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
PCDH9-202ENST00000377865 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
PCDH9-202ENST00000377865 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
PCDH9-202ENST00000377865 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
PCDH9-202ENST00000377865 LCE1EQ5T753 118 aa1.84□□□□□ -2.11
PCDH9-202ENST00000377865 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
PCDH9-202ENST00000377865 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.11
PCDH9-202ENST00000377865 KRTAP9-9Q9BYP9 154 aa1.79□□□□□ -2.12
PCDH9-202ENST00000377865 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
PCDH9-202ENST00000377865 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
PCDH9-202ENST00000377865 NEBP20929 6669 aa1.74□□□□□ -2.13
PCDH9-202ENST00000377865 KRTAP4-2Q9BYR5 136 aa1.7□□□□□ -2.14
PCDH9-202ENST00000377865 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
PCDH9-202ENST00000377865 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
PCDH9-202ENST00000377865 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
PCDH9-202ENST00000377865 KRTAP5-3Q6L8H2 238 aa1.55□□□□□ -2.16
PCDH9-202ENST00000377865 MUC5ACP98088 5654 aa1.46□□□□□ -2.17
PCDH9-202ENST00000377865 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
PCDH9-202ENST00000377865 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
PCDH9-202ENST00000377865 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
PCDH9-202ENST00000377865 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
PCDH9-202ENST00000377865 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
PCDH9-202ENST00000377865 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.19
PCDH9-202ENST00000377865 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
PCDH9-202ENST00000377865 KRTAP5-8O75690 187 aa1.34□□□□□ -2.2
PCDH9-202ENST00000377865 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
PCDH9-202ENST00000377865 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
PCDH9-202ENST00000377865 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
PCDH9-202ENST00000377865 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
PCDH9-202ENST00000377865 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
PCDH9-202ENST00000377865 AHNAKQ09666 5890 aaKnown RBP0.93□□□□□ -2.26
PCDH9-202ENST00000377865 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 140.4 ms