RNA–Protein interactions for RNA: ENST00000377533.7

SCRIB-203, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCRIB, Length 5,108 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-203ENST00000377533 MT1MQ8N339 61 aa5.44□□□□□ -1.54
SCRIB-203ENST00000377533 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
SCRIB-203ENST00000377533 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
SCRIB-203ENST00000377533 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
SCRIB-203ENST00000377533 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
SCRIB-203ENST00000377533 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
SCRIB-203ENST00000377533 MT3P25713 68 aa5.3□□□□□ -1.56
SCRIB-203ENST00000377533 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
SCRIB-203ENST00000377533 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
SCRIB-203ENST00000377533 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
SCRIB-203ENST00000377533 HMCN2Q8NDA2 5059 aa5.18□□□□□ -1.58
SCRIB-203ENST00000377533 MT4P47944 62 aa5.18□□□□□ -1.58
SCRIB-203ENST00000377533 KRTAP4-3Q9BYR4 195 aa5.17□□□□□ -1.58
SCRIB-203ENST00000377533 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
SCRIB-203ENST00000377533 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
SCRIB-203ENST00000377533 MT1AP04731 61 aa5.07□□□□□ -1.6
SCRIB-203ENST00000377533 MUC2Q02817 5179 aa5.04□□□□□ -1.6
SCRIB-203ENST00000377533 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
SCRIB-203ENST00000377533 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
SCRIB-203ENST00000377533 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
SCRIB-203ENST00000377533 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
SCRIB-203ENST00000377533 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
SCRIB-203ENST00000377533 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
SCRIB-203ENST00000377533 PRM1P04553 51 aa4.9□□□□□ -1.62
SCRIB-203ENST00000377533 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.62
SCRIB-203ENST00000377533 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
SCRIB-203ENST00000377533 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
SCRIB-203ENST00000377533 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
SCRIB-203ENST00000377533 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
SCRIB-203ENST00000377533 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
SCRIB-203ENST00000377533 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.65
SCRIB-203ENST00000377533 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
SCRIB-203ENST00000377533 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
SCRIB-203ENST00000377533 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
SCRIB-203ENST00000377533 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
SCRIB-203ENST00000377533 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
SCRIB-203ENST00000377533 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.68
SCRIB-203ENST00000377533 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
SCRIB-203ENST00000377533 USH2AO75445 5202 aa4.5□□□□□ -1.69
SCRIB-203ENST00000377533 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
SCRIB-203ENST00000377533 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
SCRIB-203ENST00000377533 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
SCRIB-203ENST00000377533 KMT2DO14686 5537 aa4.19□□□□□ -1.74
SCRIB-203ENST00000377533 NEBP20929 6669 aa4.18□□□□□ -1.74
SCRIB-203ENST00000377533 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
SCRIB-203ENST00000377533 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
SCRIB-203ENST00000377533 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
SCRIB-203ENST00000377533 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
SCRIB-203ENST00000377533 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
SCRIB-203ENST00000377533 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
SCRIB-203ENST00000377533 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
SCRIB-203ENST00000377533 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
SCRIB-203ENST00000377533 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
SCRIB-203ENST00000377533 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.8
SCRIB-203ENST00000377533 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
SCRIB-203ENST00000377533 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
SCRIB-203ENST00000377533 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
SCRIB-203ENST00000377533 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
SCRIB-203ENST00000377533 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
SCRIB-203ENST00000377533 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
SCRIB-203ENST00000377533 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
SCRIB-203ENST00000377533 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
SCRIB-203ENST00000377533 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
SCRIB-203ENST00000377533 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
SCRIB-203ENST00000377533 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
SCRIB-203ENST00000377533 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
SCRIB-203ENST00000377533 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
SCRIB-203ENST00000377533 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
SCRIB-203ENST00000377533 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
SCRIB-203ENST00000377533 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
SCRIB-203ENST00000377533 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
SCRIB-203ENST00000377533 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
SCRIB-203ENST00000377533 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
SCRIB-203ENST00000377533 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
SCRIB-203ENST00000377533 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
SCRIB-203ENST00000377533 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
SCRIB-203ENST00000377533 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 7.6 ms