RNA–Protein interactions for RNA: ENST00000377255.3

ZKSCAN3-203, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-203ENST00000377255 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
ZKSCAN3-203ENST00000377255 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
ZKSCAN3-203ENST00000377255 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
ZKSCAN3-203ENST00000377255 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
ZKSCAN3-203ENST00000377255 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
ZKSCAN3-203ENST00000377255 LCE2DQ5TA82 110 aaPredicted RBP3.97□□□□□ -1.77
ZKSCAN3-203ENST00000377255 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
ZKSCAN3-203ENST00000377255 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
ZKSCAN3-203ENST00000377255 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
ZKSCAN3-203ENST00000377255 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
ZKSCAN3-203ENST00000377255 MT3P25713 68 aa3.87□□□□□ -1.79
ZKSCAN3-203ENST00000377255 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
ZKSCAN3-203ENST00000377255 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
ZKSCAN3-203ENST00000377255 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
ZKSCAN3-203ENST00000377255 MT1AP04731 61 aa3.78□□□□□ -1.8
ZKSCAN3-203ENST00000377255 MUC2Q02817 5179 aa3.75□□□□□ -1.81
ZKSCAN3-203ENST00000377255 MT4P47944 62 aa3.7□□□□□ -1.82
ZKSCAN3-203ENST00000377255 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
ZKSCAN3-203ENST00000377255 PRM1P04553 51 aa3.67□□□□□ -1.82
ZKSCAN3-203ENST00000377255 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
ZKSCAN3-203ENST00000377255 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
ZKSCAN3-203ENST00000377255 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
ZKSCAN3-203ENST00000377255 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
ZKSCAN3-203ENST00000377255 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
ZKSCAN3-203ENST00000377255 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
ZKSCAN3-203ENST00000377255 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
ZKSCAN3-203ENST00000377255 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
ZKSCAN3-203ENST00000377255 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
ZKSCAN3-203ENST00000377255 USH2AO75445 5202 aa3.49□□□□□ -1.85
ZKSCAN3-203ENST00000377255 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
ZKSCAN3-203ENST00000377255 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
ZKSCAN3-203ENST00000377255 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
ZKSCAN3-203ENST00000377255 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
ZKSCAN3-203ENST00000377255 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
ZKSCAN3-203ENST00000377255 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
ZKSCAN3-203ENST00000377255 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
ZKSCAN3-203ENST00000377255 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
ZKSCAN3-203ENST00000377255 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
ZKSCAN3-203ENST00000377255 KMT2DO14686 5537 aa3.26□□□□□ -1.89
ZKSCAN3-203ENST00000377255 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
ZKSCAN3-203ENST00000377255 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
ZKSCAN3-203ENST00000377255 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
ZKSCAN3-203ENST00000377255 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
ZKSCAN3-203ENST00000377255 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
ZKSCAN3-203ENST00000377255 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
ZKSCAN3-203ENST00000377255 NEBP20929 6669 aa2.97□□□□□ -1.93
ZKSCAN3-203ENST00000377255 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
ZKSCAN3-203ENST00000377255 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
ZKSCAN3-203ENST00000377255 MDN1Q9NU22 5596 aa2.9□□□□□ -1.94
ZKSCAN3-203ENST00000377255 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
ZKSCAN3-203ENST00000377255 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
ZKSCAN3-203ENST00000377255 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
ZKSCAN3-203ENST00000377255 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
ZKSCAN3-203ENST00000377255 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
ZKSCAN3-203ENST00000377255 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
ZKSCAN3-203ENST00000377255 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
ZKSCAN3-203ENST00000377255 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
ZKSCAN3-203ENST00000377255 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.01
ZKSCAN3-203ENST00000377255 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
ZKSCAN3-203ENST00000377255 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
ZKSCAN3-203ENST00000377255 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
ZKSCAN3-203ENST00000377255 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
ZKSCAN3-203ENST00000377255 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
ZKSCAN3-203ENST00000377255 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
ZKSCAN3-203ENST00000377255 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
ZKSCAN3-203ENST00000377255 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
ZKSCAN3-203ENST00000377255 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
ZKSCAN3-203ENST00000377255 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
ZKSCAN3-203ENST00000377255 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
ZKSCAN3-203ENST00000377255 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
ZKSCAN3-203ENST00000377255 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
ZKSCAN3-203ENST00000377255 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
ZKSCAN3-203ENST00000377255 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
ZKSCAN3-203ENST00000377255 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
ZKSCAN3-203ENST00000377255 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
ZKSCAN3-203ENST00000377255 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
ZKSCAN3-203ENST00000377255 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 38.6 ms