RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
MDC1-201ENST00000376406 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
MDC1-201ENST00000376406 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
MDC1-201ENST00000376406 MT4P47944 62 aa3.37□□□□□ -1.87
MDC1-201ENST00000376406 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
MDC1-201ENST00000376406 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
MDC1-201ENST00000376406 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
MDC1-201ENST00000376406 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
MDC1-201ENST00000376406 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
MDC1-201ENST00000376406 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
MDC1-201ENST00000376406 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
MDC1-201ENST00000376406 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
MDC1-201ENST00000376406 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
MDC1-201ENST00000376406 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
MDC1-201ENST00000376406 PRM1P04553 51 aa3.24□□□□□ -1.89
MDC1-201ENST00000376406 MT1AP04731 61 aa3.24□□□□□ -1.89
MDC1-201ENST00000376406 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
MDC1-201ENST00000376406 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
MDC1-201ENST00000376406 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
MDC1-201ENST00000376406 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
MDC1-201ENST00000376406 ABCA13Q86UQ4 5058 aa3.15□□□□□ -1.91
MDC1-201ENST00000376406 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
MDC1-201ENST00000376406 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
MDC1-201ENST00000376406 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
MDC1-201ENST00000376406 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
MDC1-201ENST00000376406 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
MDC1-201ENST00000376406 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
MDC1-201ENST00000376406 KRTAP9-4Q9BYQ2 154 aa3□□□□□ -1.93
MDC1-201ENST00000376406 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
MDC1-201ENST00000376406 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
MDC1-201ENST00000376406 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
MDC1-201ENST00000376406 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
MDC1-201ENST00000376406 MUC2Q02817 5179 aa2.86□□□□□ -1.95
MDC1-201ENST00000376406 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.95
MDC1-201ENST00000376406 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
MDC1-201ENST00000376406 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
MDC1-201ENST00000376406 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
MDC1-201ENST00000376406 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
MDC1-201ENST00000376406 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
MDC1-201ENST00000376406 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
MDC1-201ENST00000376406 KMT2DO14686 5537 aa2.59□□□□□ -2
MDC1-201ENST00000376406 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
MDC1-201ENST00000376406 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
MDC1-201ENST00000376406 USH2AO75445 5202 aa2.51□□□□□ -2.01
MDC1-201ENST00000376406 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
MDC1-201ENST00000376406 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
MDC1-201ENST00000376406 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
MDC1-201ENST00000376406 NEBP20929 6669 aa2.43□□□□□ -2.02
MDC1-201ENST00000376406 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
MDC1-201ENST00000376406 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
MDC1-201ENST00000376406 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
MDC1-201ENST00000376406 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
MDC1-201ENST00000376406 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
MDC1-201ENST00000376406 MUC12Q9UKN1 5478 aa2.19□□□□□ -2.06
MDC1-201ENST00000376406 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
MDC1-201ENST00000376406 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
MDC1-201ENST00000376406 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
MDC1-201ENST00000376406 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
MDC1-201ENST00000376406 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
MDC1-201ENST00000376406 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
MDC1-201ENST00000376406 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
MDC1-201ENST00000376406 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
MDC1-201ENST00000376406 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
MDC1-201ENST00000376406 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
MDC1-201ENST00000376406 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
MDC1-201ENST00000376406 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.13
MDC1-201ENST00000376406 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
MDC1-201ENST00000376406 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
MDC1-201ENST00000376406 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
MDC1-201ENST00000376406 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
MDC1-201ENST00000376406 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
MDC1-201ENST00000376406 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
MDC1-201ENST00000376406 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
MDC1-201ENST00000376406 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
MDC1-201ENST00000376406 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
MDC1-201ENST00000376406 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
MDC1-201ENST00000376406 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms