RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
SPEN-201ENST00000375759 MT1AP04731 61 aa2.8□□□□□ -1.96
SPEN-201ENST00000375759 PCLOQ9Y6V0 5065 aa2.77□□□□□ -1.97
SPEN-201ENST00000375759 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
SPEN-201ENST00000375759 KRTAP4-9Q9BYQ8 210 aa2.72□□□□□ -1.97
SPEN-201ENST00000375759 HERC2O95714 4834 aa2.72□□□□□ -1.97
SPEN-201ENST00000375759 KIAA1109Q2LD37 5005 aa2.7□□□□□ -1.98
SPEN-201ENST00000375759 HYDINQ4G0P3 5121 aa2.7□□□□□ -1.98
SPEN-201ENST00000375759 SYNE2Q8WXH0 6885 aaKnown RBP2.69□□□□□ -1.98
SPEN-201ENST00000375759 LCE5AQ5TCM9 118 aa2.68□□□□□ -1.98
SPEN-201ENST00000375759 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
SPEN-201ENST00000375759 KRTAP9-2Q9BYQ4 174 aa2.64□□□□□ -1.99
SPEN-201ENST00000375759 BIRC6Q9NR09 4857 aa2.62□□□□□ -1.99
SPEN-201ENST00000375759 HERC1Q15751 4861 aa2.59□□□□□ -2
SPEN-201ENST00000375759 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -2
SPEN-201ENST00000375759 LCE1AQ5T7P2 110 aa2.59□□□□□ -2
SPEN-201ENST00000375759 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
SPEN-201ENST00000375759 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
SPEN-201ENST00000375759 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
SPEN-201ENST00000375759 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
SPEN-201ENST00000375759 LCE2AQ5TA79 106 aaPredicted RBP2.52□□□□□ -2.01
SPEN-201ENST00000375759 KRTAP9-7A8MTY7 169 aa2.51□□□□□ -2.01
SPEN-201ENST00000375759 LCE4AQ5TA78 99 aa2.51□□□□□ -2.01
SPEN-201ENST00000375759 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
SPEN-201ENST00000375759 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
SPEN-201ENST00000375759 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
SPEN-201ENST00000375759 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SPEN-201ENST00000375759 EPPK1P58107 5090 aaKnown RBP2.47□□□□□ -2.01
SPEN-201ENST00000375759 KRTAP9-6A0A140TA67 174 aa2.44□□□□□ -2.02
SPEN-201ENST00000375759 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
SPEN-201ENST00000375759 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
SPEN-201ENST00000375759 RNF213Q63HN8 5207 aa2.37□□□□□ -2.03
SPEN-201ENST00000375759 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
SPEN-201ENST00000375759 FSIP2Q5CZC0 6907 aa2.37□□□□□ -2.03
SPEN-201ENST00000375759 MUC2Q02817 5179 aa2.34□□□□□ -2.03
SPEN-201ENST00000375759 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
SPEN-201ENST00000375759 ABCA13Q86UQ4 5058 aa2.31□□□□□ -2.04
SPEN-201ENST00000375759 FAT4Q6V0I7 4981 aa2.3□□□□□ -2.04
SPEN-201ENST00000375759 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.27□□□□□ -2.05
SPEN-201ENST00000375759 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
SPEN-201ENST00000375759 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
SPEN-201ENST00000375759 FCGBPQ9Y6R7 5405 aaPredicted RBP2.1□□□□□ -2.07
SPEN-201ENST00000375759 KMT2DO14686 5537 aa2.1□□□□□ -2.07
SPEN-201ENST00000375759 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
SPEN-201ENST00000375759 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
SPEN-201ENST00000375759 USH2AO75445 5202 aa2.03□□□□□ -2.09
SPEN-201ENST00000375759 KRTAP4-6Q9BYQ5 205 aa2.02□□□□□ -2.09
SPEN-201ENST00000375759 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
SPEN-201ENST00000375759 NEBP20929 6669 aa1.97□□□□□ -2.09
SPEN-201ENST00000375759 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
SPEN-201ENST00000375759 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SPEN-201ENST00000375759 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
SPEN-201ENST00000375759 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
SPEN-201ENST00000375759 KRTAP4-12Q9BQ66 201 aa1.85□□□□□ -2.11
SPEN-201ENST00000375759 KRTAP4-2Q9BYR5 136 aa1.85□□□□□ -2.11
SPEN-201ENST00000375759 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
SPEN-201ENST00000375759 MDN1Q9NU22 5596 aa1.84□□□□□ -2.11
SPEN-201ENST00000375759 SSPOA2VEC9 5147 aa1.82□□□□□ -2.12
SPEN-201ENST00000375759 MUC12Q9UKN1 5478 aa1.78□□□□□ -2.12
SPEN-201ENST00000375759 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
SPEN-201ENST00000375759 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
SPEN-201ENST00000375759 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
SPEN-201ENST00000375759 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
SPEN-201ENST00000375759 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
SPEN-201ENST00000375759 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
SPEN-201ENST00000375759 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
SPEN-201ENST00000375759 KRTAP5-2Q701N4 177 aa1.42□□□□□ -2.18
SPEN-201ENST00000375759 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
SPEN-201ENST00000375759 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
SPEN-201ENST00000375759 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
SPEN-201ENST00000375759 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.2
SPEN-201ENST00000375759 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
SPEN-201ENST00000375759 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
SPEN-201ENST00000375759 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
SPEN-201ENST00000375759 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
SPEN-201ENST00000375759 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
SPEN-201ENST00000375759 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 328.6 ms