RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
TGFBR1-202ENST00000374994 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
TGFBR1-202ENST00000374994 MT3P25713 68 aa6.41□□□□□ -1.38
TGFBR1-202ENST00000374994 RNF213Q63HN8 5207 aa6.41□□□□□ -1.38
TGFBR1-202ENST00000374994 PRM1P04553 51 aa6.35□□□□□ -1.39
TGFBR1-202ENST00000374994 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
TGFBR1-202ENST00000374994 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
TGFBR1-202ENST00000374994 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
TGFBR1-202ENST00000374994 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
TGFBR1-202ENST00000374994 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
TGFBR1-202ENST00000374994 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
TGFBR1-202ENST00000374994 MT1AP04731 61 aa6.24□□□□□ -1.41
TGFBR1-202ENST00000374994 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
TGFBR1-202ENST00000374994 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
TGFBR1-202ENST00000374994 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
TGFBR1-202ENST00000374994 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
TGFBR1-202ENST00000374994 MT4P47944 62 aa5.83□□□□□ -1.48
TGFBR1-202ENST00000374994 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
TGFBR1-202ENST00000374994 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
TGFBR1-202ENST00000374994 MUC2Q02817 5179 aa5.77□□□□□ -1.49
TGFBR1-202ENST00000374994 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
TGFBR1-202ENST00000374994 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
TGFBR1-202ENST00000374994 LCE1BQ5T7P3 118 aa5.74□□□□□ -1.49
TGFBR1-202ENST00000374994 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
TGFBR1-202ENST00000374994 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
TGFBR1-202ENST00000374994 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
TGFBR1-202ENST00000374994 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
TGFBR1-202ENST00000374994 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
TGFBR1-202ENST00000374994 KRTAP9-7A8MTY7 169 aa5.48□□□□□ -1.53
TGFBR1-202ENST00000374994 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
TGFBR1-202ENST00000374994 USH2AO75445 5202 aa5.41□□□□□ -1.54
TGFBR1-202ENST00000374994 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
TGFBR1-202ENST00000374994 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
TGFBR1-202ENST00000374994 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
TGFBR1-202ENST00000374994 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
TGFBR1-202ENST00000374994 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
TGFBR1-202ENST00000374994 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
TGFBR1-202ENST00000374994 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
TGFBR1-202ENST00000374994 KMT2DO14686 5537 aa4.92□□□□□ -1.62
TGFBR1-202ENST00000374994 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
TGFBR1-202ENST00000374994 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.63
TGFBR1-202ENST00000374994 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
TGFBR1-202ENST00000374994 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
TGFBR1-202ENST00000374994 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
TGFBR1-202ENST00000374994 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
TGFBR1-202ENST00000374994 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
TGFBR1-202ENST00000374994 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
TGFBR1-202ENST00000374994 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
TGFBR1-202ENST00000374994 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
TGFBR1-202ENST00000374994 NEBP20929 6669 aa4.6□□□□□ -1.67
TGFBR1-202ENST00000374994 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
TGFBR1-202ENST00000374994 MUC19Q7Z5P9 8384 aa4.53□□□□□ -1.68
TGFBR1-202ENST00000374994 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
TGFBR1-202ENST00000374994 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
TGFBR1-202ENST00000374994 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
TGFBR1-202ENST00000374994 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
TGFBR1-202ENST00000374994 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
TGFBR1-202ENST00000374994 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
TGFBR1-202ENST00000374994 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
TGFBR1-202ENST00000374994 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
TGFBR1-202ENST00000374994 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
TGFBR1-202ENST00000374994 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
TGFBR1-202ENST00000374994 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
TGFBR1-202ENST00000374994 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
TGFBR1-202ENST00000374994 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
TGFBR1-202ENST00000374994 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
TGFBR1-202ENST00000374994 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
TGFBR1-202ENST00000374994 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
TGFBR1-202ENST00000374994 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
TGFBR1-202ENST00000374994 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
TGFBR1-202ENST00000374994 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
TGFBR1-202ENST00000374994 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
TGFBR1-202ENST00000374994 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
TGFBR1-202ENST00000374994 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
TGFBR1-202ENST00000374994 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
TGFBR1-202ENST00000374994 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
TGFBR1-202ENST00000374994 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms