RNA–Protein interactions for RNA: ENST00000374152.7

ARID1A-202, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-202ENST00000374152 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
ARID1A-202ENST00000374152 MT3P25713 68 aa3.03□□□□□ -1.92
ARID1A-202ENST00000374152 LCE2AQ5TA79 106 aaPredicted RBP3□□□□□ -1.93
ARID1A-202ENST00000374152 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
ARID1A-202ENST00000374152 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
ARID1A-202ENST00000374152 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
ARID1A-202ENST00000374152 MT1MQ8N339 61 aa2.97□□□□□ -1.93
ARID1A-202ENST00000374152 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
ARID1A-202ENST00000374152 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
ARID1A-202ENST00000374152 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
ARID1A-202ENST00000374152 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
ARID1A-202ENST00000374152 HMCN2Q8NDA2 5059 aa2.91□□□□□ -1.94
ARID1A-202ENST00000374152 FSIP2Q5CZC0 6907 aa2.88□□□□□ -1.95
ARID1A-202ENST00000374152 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
ARID1A-202ENST00000374152 LCE1EQ5T753 118 aa2.84□□□□□ -1.96
ARID1A-202ENST00000374152 LCE1FQ5T754 118 aa2.84□□□□□ -1.96
ARID1A-202ENST00000374152 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.96
ARID1A-202ENST00000374152 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
ARID1A-202ENST00000374152 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
ARID1A-202ENST00000374152 PRM1P04553 51 aa2.79□□□□□ -1.96
ARID1A-202ENST00000374152 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
ARID1A-202ENST00000374152 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
ARID1A-202ENST00000374152 MUC2Q02817 5179 aa2.74□□□□□ -1.97
ARID1A-202ENST00000374152 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
ARID1A-202ENST00000374152 KRTAP4-9Q9BYQ8 210 aa2.72□□□□□ -1.97
ARID1A-202ENST00000374152 MT1AP04731 61 aa2.7□□□□□ -1.98
ARID1A-202ENST00000374152 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.69□□□□□ -1.98
ARID1A-202ENST00000374152 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
ARID1A-202ENST00000374152 KRTAP2-3P0C7H8 128 aa2.65□□□□□ -1.99
ARID1A-202ENST00000374152 KRTAP2-4Q9BYR9 128 aa2.65□□□□□ -1.99
ARID1A-202ENST00000374152 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
ARID1A-202ENST00000374152 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
ARID1A-202ENST00000374152 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
ARID1A-202ENST00000374152 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
ARID1A-202ENST00000374152 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
ARID1A-202ENST00000374152 KRTAP9-4Q9BYQ2 154 aa2.54□□□□□ -2
ARID1A-202ENST00000374152 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
ARID1A-202ENST00000374152 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
ARID1A-202ENST00000374152 KMT2DO14686 5537 aa2.44□□□□□ -2.02
ARID1A-202ENST00000374152 USH2AO75445 5202 aa2.42□□□□□ -2.02
ARID1A-202ENST00000374152 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
ARID1A-202ENST00000374152 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
ARID1A-202ENST00000374152 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
ARID1A-202ENST00000374152 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
ARID1A-202ENST00000374152 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
ARID1A-202ENST00000374152 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
ARID1A-202ENST00000374152 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
ARID1A-202ENST00000374152 NEBP20929 6669 aa2.26□□□□□ -2.05
ARID1A-202ENST00000374152 KRTAP4-6Q9BYQ5 205 aa2.26□□□□□ -2.05
ARID1A-202ENST00000374152 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
ARID1A-202ENST00000374152 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
ARID1A-202ENST00000374152 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.07
ARID1A-202ENST00000374152 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
ARID1A-202ENST00000374152 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
ARID1A-202ENST00000374152 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
ARID1A-202ENST00000374152 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
ARID1A-202ENST00000374152 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
ARID1A-202ENST00000374152 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
ARID1A-202ENST00000374152 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
ARID1A-202ENST00000374152 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
ARID1A-202ENST00000374152 KRTAP5-3Q6L8H2 238 aa1.78□□□□□ -2.12
ARID1A-202ENST00000374152 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
ARID1A-202ENST00000374152 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
ARID1A-202ENST00000374152 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
ARID1A-202ENST00000374152 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
ARID1A-202ENST00000374152 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
ARID1A-202ENST00000374152 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
ARID1A-202ENST00000374152 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
ARID1A-202ENST00000374152 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
ARID1A-202ENST00000374152 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.18
ARID1A-202ENST00000374152 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
ARID1A-202ENST00000374152 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
ARID1A-202ENST00000374152 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
ARID1A-202ENST00000374152 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
ARID1A-202ENST00000374152 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
ARID1A-202ENST00000374152 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
ARID1A-202ENST00000374152 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms