RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
RLF-201ENST00000372771 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
RLF-201ENST00000372771 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
RLF-201ENST00000372771 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
RLF-201ENST00000372771 MT4P47944 62 aa4.55□□□□□ -1.68
RLF-201ENST00000372771 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
RLF-201ENST00000372771 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
RLF-201ENST00000372771 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
RLF-201ENST00000372771 RNF213Q63HN8 5207 aa4.48□□□□□ -1.69
RLF-201ENST00000372771 PRM1P04553 51 aa4.48□□□□□ -1.69
RLF-201ENST00000372771 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
RLF-201ENST00000372771 MT3P25713 68 aa4.44□□□□□ -1.7
RLF-201ENST00000372771 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
RLF-201ENST00000372771 MUC2Q02817 5179 aa4.37□□□□□ -1.71
RLF-201ENST00000372771 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.71
RLF-201ENST00000372771 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
RLF-201ENST00000372771 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
RLF-201ENST00000372771 MT1AP04731 61 aa4.27□□□□□ -1.73
RLF-201ENST00000372771 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
RLF-201ENST00000372771 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
RLF-201ENST00000372771 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
RLF-201ENST00000372771 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
RLF-201ENST00000372771 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.73
RLF-201ENST00000372771 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
RLF-201ENST00000372771 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
RLF-201ENST00000372771 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
RLF-201ENST00000372771 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
RLF-201ENST00000372771 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
RLF-201ENST00000372771 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
RLF-201ENST00000372771 KMT2DO14686 5537 aa3.96□□□□□ -1.77
RLF-201ENST00000372771 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
RLF-201ENST00000372771 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
RLF-201ENST00000372771 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
RLF-201ENST00000372771 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
RLF-201ENST00000372771 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
RLF-201ENST00000372771 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
RLF-201ENST00000372771 USH2AO75445 5202 aa3.83□□□□□ -1.8
RLF-201ENST00000372771 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
RLF-201ENST00000372771 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
RLF-201ENST00000372771 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
RLF-201ENST00000372771 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
RLF-201ENST00000372771 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
RLF-201ENST00000372771 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
RLF-201ENST00000372771 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
RLF-201ENST00000372771 SSPOA2VEC9 5147 aa3.59□□□□□ -1.83
RLF-201ENST00000372771 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
RLF-201ENST00000372771 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
RLF-201ENST00000372771 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
RLF-201ENST00000372771 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
RLF-201ENST00000372771 NEBP20929 6669 aa3.33□□□□□ -1.88
RLF-201ENST00000372771 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
RLF-201ENST00000372771 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
RLF-201ENST00000372771 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
RLF-201ENST00000372771 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
RLF-201ENST00000372771 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
RLF-201ENST00000372771 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
RLF-201ENST00000372771 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
RLF-201ENST00000372771 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
RLF-201ENST00000372771 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
RLF-201ENST00000372771 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
RLF-201ENST00000372771 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
RLF-201ENST00000372771 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
RLF-201ENST00000372771 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
RLF-201ENST00000372771 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
RLF-201ENST00000372771 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
RLF-201ENST00000372771 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
RLF-201ENST00000372771 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
RLF-201ENST00000372771 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
RLF-201ENST00000372771 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
RLF-201ENST00000372771 PHGR1C9JFL3 82 aa2.15□□□□□ -2.06
RLF-201ENST00000372771 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
RLF-201ENST00000372771 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
RLF-201ENST00000372771 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
RLF-201ENST00000372771 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
RLF-201ENST00000372771 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
RLF-201ENST00000372771 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
RLF-201ENST00000372771 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 77 ms