RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
SPTAN1-203ENST00000372739 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
SPTAN1-203ENST00000372739 MT1MQ8N339 61 aa2.92□□□□□ -1.94
SPTAN1-203ENST00000372739 LPAP08519 4548 aa2.9□□□□□ -1.95
SPTAN1-203ENST00000372739 PRM1P04553 51 aa2.86□□□□□ -1.95
SPTAN1-203ENST00000372739 LCE5AQ5TCM9 118 aa2.84□□□□□ -1.95
SPTAN1-203ENST00000372739 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.95
SPTAN1-203ENST00000372739 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
SPTAN1-203ENST00000372739 LRP2P98164 4655 aa2.82□□□□□ -1.96
SPTAN1-203ENST00000372739 LOC100996750A0A140TA64 210 aa2.81□□□□□ -1.96
SPTAN1-203ENST00000372739 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
SPTAN1-203ENST00000372739 KRTAP9-7A8MTY7 169 aa2.75□□□□□ -1.97
SPTAN1-203ENST00000372739 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
SPTAN1-203ENST00000372739 MT1AP04731 61 aa2.73□□□□□ -1.97
SPTAN1-203ENST00000372739 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
SPTAN1-203ENST00000372739 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
SPTAN1-203ENST00000372739 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
SPTAN1-203ENST00000372739 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
SPTAN1-203ENST00000372739 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
SPTAN1-203ENST00000372739 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
SPTAN1-203ENST00000372739 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.68□□□□□ -1.98
SPTAN1-203ENST00000372739 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
SPTAN1-203ENST00000372739 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
SPTAN1-203ENST00000372739 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
SPTAN1-203ENST00000372739 FAT4Q6V0I7 4981 aa2.63□□□□□ -1.99
SPTAN1-203ENST00000372739 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
SPTAN1-203ENST00000372739 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
SPTAN1-203ENST00000372739 KRTAP4-9Q9BYQ8 210 aa2.59□□□□□ -1.99
SPTAN1-203ENST00000372739 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
SPTAN1-203ENST00000372739 KRTAP9-4Q9BYQ2 154 aa2.54□□□□□ -2
SPTAN1-203ENST00000372739 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
SPTAN1-203ENST00000372739 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
SPTAN1-203ENST00000372739 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
SPTAN1-203ENST00000372739 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
SPTAN1-203ENST00000372739 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
SPTAN1-203ENST00000372739 MUC2Q02817 5179 aa2.44□□□□□ -2.02
SPTAN1-203ENST00000372739 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
SPTAN1-203ENST00000372739 KRTAP9-6A8MVA2 160 aa2.41□□□□□ -2.02
SPTAN1-203ENST00000372739 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
SPTAN1-203ENST00000372739 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
SPTAN1-203ENST00000372739 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
SPTAN1-203ENST00000372739 NEBP20929 6669 aa2.21□□□□□ -2.06
SPTAN1-203ENST00000372739 KMT2DO14686 5537 aa2.18□□□□□ -2.06
SPTAN1-203ENST00000372739 USH2AO75445 5202 aa2.17□□□□□ -2.06
SPTAN1-203ENST00000372739 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
SPTAN1-203ENST00000372739 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
SPTAN1-203ENST00000372739 FCGBPQ9Y6R7 5405 aaPredicted RBP2.1□□□□□ -2.07
SPTAN1-203ENST00000372739 KRTAP4-11Q9BYQ6 195 aa2.07□□□□□ -2.08
SPTAN1-203ENST00000372739 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
SPTAN1-203ENST00000372739 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
SPTAN1-203ENST00000372739 KRTAP4-6Q9BYQ5 205 aa2.05□□□□□ -2.08
SPTAN1-203ENST00000372739 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
SPTAN1-203ENST00000372739 KRTAP4-12Q9BQ66 201 aa1.95□□□□□ -2.1
SPTAN1-203ENST00000372739 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
SPTAN1-203ENST00000372739 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
SPTAN1-203ENST00000372739 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
SPTAN1-203ENST00000372739 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
SPTAN1-203ENST00000372739 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
SPTAN1-203ENST00000372739 KRTAP5-3Q6L8H2 238 aa1.79□□□□□ -2.12
SPTAN1-203ENST00000372739 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
SPTAN1-203ENST00000372739 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
SPTAN1-203ENST00000372739 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
SPTAN1-203ENST00000372739 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
SPTAN1-203ENST00000372739 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
SPTAN1-203ENST00000372739 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
SPTAN1-203ENST00000372739 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
SPTAN1-203ENST00000372739 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
SPTAN1-203ENST00000372739 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
SPTAN1-203ENST00000372739 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
SPTAN1-203ENST00000372739 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SPTAN1-203ENST00000372739 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
SPTAN1-203ENST00000372739 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.18
SPTAN1-203ENST00000372739 KRTAP5-1Q6L8H4 278 aa1.4□□□□□ -2.19
SPTAN1-203ENST00000372739 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
SPTAN1-203ENST00000372739 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
SPTAN1-203ENST00000372739 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
SPTAN1-203ENST00000372739 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms