RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 MT3P25713 68 aa7.21□□□□□ -1.26
RAPGEF1-203ENST00000372195 LCE1BQ5T7P3 118 aa7.19□□□□□ -1.26
RAPGEF1-203ENST00000372195 KRTAP4-9Q9BYQ8 210 aa7.17□□□□□ -1.26
RAPGEF1-203ENST00000372195 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
RAPGEF1-203ENST00000372195 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
RAPGEF1-203ENST00000372195 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
RAPGEF1-203ENST00000372195 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.3
RAPGEF1-203ENST00000372195 HMCN2Q8NDA2 5059 aa6.86□□□□□ -1.31
RAPGEF1-203ENST00000372195 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
RAPGEF1-203ENST00000372195 KRTAP2-3P0C7H8 128 aa6.8□□□□□ -1.32
RAPGEF1-203ENST00000372195 KRTAP2-4Q9BYR9 128 aa6.8□□□□□ -1.32
RAPGEF1-203ENST00000372195 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
RAPGEF1-203ENST00000372195 MT1AP04731 61 aa6.78□□□□□ -1.32
RAPGEF1-203ENST00000372195 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
RAPGEF1-203ENST00000372195 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
RAPGEF1-203ENST00000372195 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
RAPGEF1-203ENST00000372195 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
RAPGEF1-203ENST00000372195 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
RAPGEF1-203ENST00000372195 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
RAPGEF1-203ENST00000372195 KRTAP9-6A8MVA2 160 aa6.59□□□□□ -1.35
RAPGEF1-203ENST00000372195 KRTAP6-1Q3LI64 71 aa6.59□□□□□ -1.35
RAPGEF1-203ENST00000372195 KRTAP6-2Q3LI66 62 aa6.53□□□□□ -1.36
RAPGEF1-203ENST00000372195 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
RAPGEF1-203ENST00000372195 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
RAPGEF1-203ENST00000372195 KRTAP9-6A0A140TA67 174 aa6.47□□□□□ -1.37
RAPGEF1-203ENST00000372195 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
RAPGEF1-203ENST00000372195 MUC2Q02817 5179 aa6.39□□□□□ -1.39
RAPGEF1-203ENST00000372195 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
RAPGEF1-203ENST00000372195 KRTAP20-1Q3LI63 56 aa6.35□□□□□ -1.39
RAPGEF1-203ENST00000372195 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
RAPGEF1-203ENST00000372195 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
RAPGEF1-203ENST00000372195 LCE1CQ5T751 118 aa6.11□□□□□ -1.43
RAPGEF1-203ENST00000372195 LCE1EQ5T753 118 aa6.11□□□□□ -1.43
RAPGEF1-203ENST00000372195 LCE1FQ5T754 118 aa6.11□□□□□ -1.43
RAPGEF1-203ENST00000372195 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
RAPGEF1-203ENST00000372195 OBSCNQ5VST9 7968 aa6.05□□□□□ -1.44
RAPGEF1-203ENST00000372195 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
RAPGEF1-203ENST00000372195 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
RAPGEF1-203ENST00000372195 KMT2DO14686 5537 aa5.86□□□□□ -1.47
RAPGEF1-203ENST00000372195 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
RAPGEF1-203ENST00000372195 FCGBPQ9Y6R7 5405 aaPredicted RBP5.7□□□□□ -1.5
RAPGEF1-203ENST00000372195 USH2AO75445 5202 aa5.61□□□□□ -1.51
RAPGEF1-203ENST00000372195 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.52
RAPGEF1-203ENST00000372195 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
RAPGEF1-203ENST00000372195 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
RAPGEF1-203ENST00000372195 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
RAPGEF1-203ENST00000372195 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
RAPGEF1-203ENST00000372195 MACF1Q9UPN3 7388 aaKnown RBP5.33□□□□□ -1.56
RAPGEF1-203ENST00000372195 KRTAP4-4Q9BYR3 166 aa5.21□□□□□ -1.57
RAPGEF1-203ENST00000372195 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
RAPGEF1-203ENST00000372195 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
RAPGEF1-203ENST00000372195 NEBP20929 6669 aa5.06□□□□□ -1.6
RAPGEF1-203ENST00000372195 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
RAPGEF1-203ENST00000372195 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
RAPGEF1-203ENST00000372195 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
RAPGEF1-203ENST00000372195 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
RAPGEF1-203ENST00000372195 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
RAPGEF1-203ENST00000372195 MUC19Q7Z5P9 8384 aa4.56□□□□□ -1.68
RAPGEF1-203ENST00000372195 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
RAPGEF1-203ENST00000372195 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
RAPGEF1-203ENST00000372195 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
RAPGEF1-203ENST00000372195 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
RAPGEF1-203ENST00000372195 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
RAPGEF1-203ENST00000372195 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
RAPGEF1-203ENST00000372195 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
RAPGEF1-203ENST00000372195 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
RAPGEF1-203ENST00000372195 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
RAPGEF1-203ENST00000372195 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
RAPGEF1-203ENST00000372195 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
RAPGEF1-203ENST00000372195 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
RAPGEF1-203ENST00000372195 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
RAPGEF1-203ENST00000372195 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
RAPGEF1-203ENST00000372195 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
RAPGEF1-203ENST00000372195 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
RAPGEF1-203ENST00000372195 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
RAPGEF1-203ENST00000372195 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
RAPGEF1-203ENST00000372195 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms