RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
CDC42BPA-202ENST00000366764 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-202ENST00000366764 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-202ENST00000366764 ABCA13Q86UQ4 5058 aa3.55□□□□□ -1.84
CDC42BPA-202ENST00000366764 MT3P25713 68 aa3.52□□□□□ -1.85
CDC42BPA-202ENST00000366764 HMCN2Q8NDA2 5059 aa3.5□□□□□ -1.85
CDC42BPA-202ENST00000366764 MT1AP04731 61 aa3.48□□□□□ -1.85
CDC42BPA-202ENST00000366764 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
CDC42BPA-202ENST00000366764 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
CDC42BPA-202ENST00000366764 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
CDC42BPA-202ENST00000366764 PRM1P04553 51 aa3.44□□□□□ -1.86
CDC42BPA-202ENST00000366764 LCE2DQ5TA82 110 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-202ENST00000366764 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
CDC42BPA-202ENST00000366764 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
CDC42BPA-202ENST00000366764 MUC2Q02817 5179 aa3.37□□□□□ -1.87
CDC42BPA-202ENST00000366764 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
CDC42BPA-202ENST00000366764 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
CDC42BPA-202ENST00000366764 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-202ENST00000366764 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
CDC42BPA-202ENST00000366764 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
CDC42BPA-202ENST00000366764 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
CDC42BPA-202ENST00000366764 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
CDC42BPA-202ENST00000366764 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
CDC42BPA-202ENST00000366764 MT4P47944 62 aa3.11□□□□□ -1.91
CDC42BPA-202ENST00000366764 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
CDC42BPA-202ENST00000366764 USH2AO75445 5202 aa3.06□□□□□ -1.92
CDC42BPA-202ENST00000366764 FSIP2Q5CZC0 6907 aa3.06□□□□□ -1.92
CDC42BPA-202ENST00000366764 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
CDC42BPA-202ENST00000366764 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
CDC42BPA-202ENST00000366764 LCE4AQ5TA78 99 aa3□□□□□ -1.93
CDC42BPA-202ENST00000366764 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
CDC42BPA-202ENST00000366764 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
CDC42BPA-202ENST00000366764 KMT2DO14686 5537 aa2.91□□□□□ -1.94
CDC42BPA-202ENST00000366764 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
CDC42BPA-202ENST00000366764 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
CDC42BPA-202ENST00000366764 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
CDC42BPA-202ENST00000366764 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-202ENST00000366764 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-202ENST00000366764 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
CDC42BPA-202ENST00000366764 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
CDC42BPA-202ENST00000366764 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
CDC42BPA-202ENST00000366764 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
CDC42BPA-202ENST00000366764 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
CDC42BPA-202ENST00000366764 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-202ENST00000366764 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-202ENST00000366764 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
CDC42BPA-202ENST00000366764 KRTAP4-6Q9BYQ5 205 aa2.49□□□□□ -2.01
CDC42BPA-202ENST00000366764 NEBP20929 6669 aa2.49□□□□□ -2.01
CDC42BPA-202ENST00000366764 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
CDC42BPA-202ENST00000366764 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
CDC42BPA-202ENST00000366764 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
CDC42BPA-202ENST00000366764 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
CDC42BPA-202ENST00000366764 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
CDC42BPA-202ENST00000366764 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.02
CDC42BPA-202ENST00000366764 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
CDC42BPA-202ENST00000366764 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
CDC42BPA-202ENST00000366764 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
CDC42BPA-202ENST00000366764 KRTAP5-3Q6L8H2 238 aa2.15□□□□□ -2.07
CDC42BPA-202ENST00000366764 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CDC42BPA-202ENST00000366764 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
CDC42BPA-202ENST00000366764 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
CDC42BPA-202ENST00000366764 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
CDC42BPA-202ENST00000366764 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
CDC42BPA-202ENST00000366764 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
CDC42BPA-202ENST00000366764 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
CDC42BPA-202ENST00000366764 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
CDC42BPA-202ENST00000366764 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CDC42BPA-202ENST00000366764 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
CDC42BPA-202ENST00000366764 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
CDC42BPA-202ENST00000366764 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
CDC42BPA-202ENST00000366764 KRTAP5-8O75690 187 aa1.84□□□□□ -2.12
CDC42BPA-202ENST00000366764 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CDC42BPA-202ENST00000366764 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
CDC42BPA-202ENST00000366764 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
CDC42BPA-202ENST00000366764 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
CDC42BPA-202ENST00000366764 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
CDC42BPA-202ENST00000366764 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 88.7 ms