RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 FLGP20930 4061 aaPredicted RBP3.77□□□□□ -1.81
CCDC144A-204ENST00000360524 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
CCDC144A-204ENST00000360524 MT3P25713 68 aa3.75□□□□□ -1.81
CCDC144A-204ENST00000360524 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
CCDC144A-204ENST00000360524 ABCA13Q86UQ4 5058 aa3.68□□□□□ -1.82
CCDC144A-204ENST00000360524 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
CCDC144A-204ENST00000360524 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
CCDC144A-204ENST00000360524 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
CCDC144A-204ENST00000360524 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
CCDC144A-204ENST00000360524 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
CCDC144A-204ENST00000360524 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
CCDC144A-204ENST00000360524 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
CCDC144A-204ENST00000360524 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
CCDC144A-204ENST00000360524 FAT4Q6V0I7 4981 aa3.55□□□□□ -1.84
CCDC144A-204ENST00000360524 MT1AP04731 61 aa3.54□□□□□ -1.84
CCDC144A-204ENST00000360524 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
CCDC144A-204ENST00000360524 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
CCDC144A-204ENST00000360524 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
CCDC144A-204ENST00000360524 HMCN2Q8NDA2 5059 aa3.52□□□□□ -1.85
CCDC144A-204ENST00000360524 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
CCDC144A-204ENST00000360524 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
CCDC144A-204ENST00000360524 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
CCDC144A-204ENST00000360524 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
CCDC144A-204ENST00000360524 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
CCDC144A-204ENST00000360524 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
CCDC144A-204ENST00000360524 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
CCDC144A-204ENST00000360524 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
CCDC144A-204ENST00000360524 MUC2Q02817 5179 aa3.37□□□□□ -1.87
CCDC144A-204ENST00000360524 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
CCDC144A-204ENST00000360524 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
CCDC144A-204ENST00000360524 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
CCDC144A-204ENST00000360524 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
CCDC144A-204ENST00000360524 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
CCDC144A-204ENST00000360524 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
CCDC144A-204ENST00000360524 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
CCDC144A-204ENST00000360524 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
CCDC144A-204ENST00000360524 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
CCDC144A-204ENST00000360524 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
CCDC144A-204ENST00000360524 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CCDC144A-204ENST00000360524 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
CCDC144A-204ENST00000360524 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
CCDC144A-204ENST00000360524 USH2AO75445 5202 aa3□□□□□ -1.93
CCDC144A-204ENST00000360524 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
CCDC144A-204ENST00000360524 KMT2DO14686 5537 aa2.92□□□□□ -1.94
CCDC144A-204ENST00000360524 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
CCDC144A-204ENST00000360524 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
CCDC144A-204ENST00000360524 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
CCDC144A-204ENST00000360524 NEBP20929 6669 aa2.76□□□□□ -1.97
CCDC144A-204ENST00000360524 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
CCDC144A-204ENST00000360524 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
CCDC144A-204ENST00000360524 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.97
CCDC144A-204ENST00000360524 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
CCDC144A-204ENST00000360524 MDN1Q9NU22 5596 aa2.65□□□□□ -1.98
CCDC144A-204ENST00000360524 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
CCDC144A-204ENST00000360524 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
CCDC144A-204ENST00000360524 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
CCDC144A-204ENST00000360524 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
CCDC144A-204ENST00000360524 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
CCDC144A-204ENST00000360524 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
CCDC144A-204ENST00000360524 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
CCDC144A-204ENST00000360524 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
CCDC144A-204ENST00000360524 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
CCDC144A-204ENST00000360524 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
CCDC144A-204ENST00000360524 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
CCDC144A-204ENST00000360524 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
CCDC144A-204ENST00000360524 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
CCDC144A-204ENST00000360524 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
CCDC144A-204ENST00000360524 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
CCDC144A-204ENST00000360524 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
CCDC144A-204ENST00000360524 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
CCDC144A-204ENST00000360524 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
CCDC144A-204ENST00000360524 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
CCDC144A-204ENST00000360524 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
CCDC144A-204ENST00000360524 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
CCDC144A-204ENST00000360524 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.17
CCDC144A-204ENST00000360524 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
CCDC144A-204ENST00000360524 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 90.5 ms