RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
COL6A6-201ENST00000358511 MT1MQ8N339 61 aa2.63□□□□□ -1.99
COL6A6-201ENST00000358511 KMT2CQ8NEZ4 4911 aaKnown RBP2.62□□□□□ -1.99
COL6A6-201ENST00000358511 LOC100996750A0A140TA64 210 aa2.6□□□□□ -1.99
COL6A6-201ENST00000358511 LCE4AQ5TA78 99 aa2.58□□□□□ -2
COL6A6-201ENST00000358511 MT1AP04731 61 aa2.56□□□□□ -2
COL6A6-201ENST00000358511 HYDINQ4G0P3 5121 aa2.53□□□□□ -2
COL6A6-201ENST00000358511 RYR2Q92736 4967 aa2.51□□□□□ -2.01
COL6A6-201ENST00000358511 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
COL6A6-201ENST00000358511 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
COL6A6-201ENST00000358511 KRTAP9-2Q9BYQ4 174 aa2.49□□□□□ -2.01
COL6A6-201ENST00000358511 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
COL6A6-201ENST00000358511 KRTAP4-9Q9BYQ8 210 aa2.46□□□□□ -2.02
COL6A6-201ENST00000358511 LCE2AQ5TA79 106 aaPredicted RBP2.45□□□□□ -2.02
COL6A6-201ENST00000358511 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
COL6A6-201ENST00000358511 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
COL6A6-201ENST00000358511 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
COL6A6-201ENST00000358511 BIRC6Q9NR09 4857 aa2.42□□□□□ -2.02
COL6A6-201ENST00000358511 HERC2O95714 4834 aa2.41□□□□□ -2.02
COL6A6-201ENST00000358511 KIAA1109Q2LD37 5005 aa2.41□□□□□ -2.02
COL6A6-201ENST00000358511 KRTAP9-6A0A140TA67 174 aa2.4□□□□□ -2.02
COL6A6-201ENST00000358511 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
COL6A6-201ENST00000358511 KRTAP9-7A8MTY7 169 aa2.34□□□□□ -2.04
COL6A6-201ENST00000358511 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
COL6A6-201ENST00000358511 HERC1Q15751 4861 aa2.31□□□□□ -2.04
COL6A6-201ENST00000358511 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
COL6A6-201ENST00000358511 KRTAP9-9Q9BYP9 154 aa2.27□□□□□ -2.05
COL6A6-201ENST00000358511 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
COL6A6-201ENST00000358511 EPPK1P58107 5090 aaKnown RBP2.25□□□□□ -2.05
COL6A6-201ENST00000358511 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
COL6A6-201ENST00000358511 KRTAP9-4Q9BYQ2 154 aa2.24□□□□□ -2.05
COL6A6-201ENST00000358511 RNF213Q63HN8 5207 aa2.21□□□□□ -2.05
COL6A6-201ENST00000358511 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
COL6A6-201ENST00000358511 ABCA13Q86UQ4 5058 aa2.18□□□□□ -2.06
COL6A6-201ENST00000358511 MUC2Q02817 5179 aa2.17□□□□□ -2.06
COL6A6-201ENST00000358511 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
COL6A6-201ENST00000358511 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.15□□□□□ -2.07
COL6A6-201ENST00000358511 UBR4Q5T4S7 5183 aa2.15□□□□□ -2.07
COL6A6-201ENST00000358511 KMT2DO14686 5537 aa2.06□□□□□ -2.08
COL6A6-201ENST00000358511 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
COL6A6-201ENST00000358511 FAT4Q6V0I7 4981 aa2.03□□□□□ -2.08
COL6A6-201ENST00000358511 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
COL6A6-201ENST00000358511 MUC12Q9UKN1 5478 aa1.94□□□□□ -2.1
COL6A6-201ENST00000358511 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
COL6A6-201ENST00000358511 FCGBPQ9Y6R7 5405 aaPredicted RBP1.91□□□□□ -2.1
COL6A6-201ENST00000358511 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.1
COL6A6-201ENST00000358511 KRTAP4-6Q9BYQ5 205 aa1.89□□□□□ -2.11
COL6A6-201ENST00000358511 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
COL6A6-201ENST00000358511 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
COL6A6-201ENST00000358511 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
COL6A6-201ENST00000358511 NEBP20929 6669 aa1.81□□□□□ -2.12
COL6A6-201ENST00000358511 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
COL6A6-201ENST00000358511 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
COL6A6-201ENST00000358511 SSPOA2VEC9 5147 aa1.79□□□□□ -2.12
COL6A6-201ENST00000358511 USH2AO75445 5202 aa1.78□□□□□ -2.12
COL6A6-201ENST00000358511 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.15
COL6A6-201ENST00000358511 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
COL6A6-201ENST00000358511 MACF1Q9UPN3 7388 aaKnown RBP1.57□□□□□ -2.16
COL6A6-201ENST00000358511 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
COL6A6-201ENST00000358511 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
COL6A6-201ENST00000358511 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
COL6A6-201ENST00000358511 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
COL6A6-201ENST00000358511 KRTAP5-3Q6L8H2 238 aa1.44□□□□□ -2.18
COL6A6-201ENST00000358511 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
COL6A6-201ENST00000358511 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
COL6A6-201ENST00000358511 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
COL6A6-201ENST00000358511 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
COL6A6-201ENST00000358511 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
COL6A6-201ENST00000358511 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.21
COL6A6-201ENST00000358511 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
COL6A6-201ENST00000358511 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.25□□□□□ -2.21
COL6A6-201ENST00000358511 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
COL6A6-201ENST00000358511 KRTAP5-1Q6L8H4 278 aa1.24□□□□□ -2.21
COL6A6-201ENST00000358511 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
COL6A6-201ENST00000358511 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
COL6A6-201ENST00000358511 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
COL6A6-201ENST00000358511 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 56.7 ms