RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 MT3P25713 68 aa3.23□□□□□ -1.89
SPTAN1-201ENST00000358161 MT4P47944 62 aa3.22□□□□□ -1.89
SPTAN1-201ENST00000358161 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
SPTAN1-201ENST00000358161 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
SPTAN1-201ENST00000358161 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
SPTAN1-201ENST00000358161 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
SPTAN1-201ENST00000358161 EPPK1P58107 5090 aaKnown RBP3.06□□□□□ -1.92
SPTAN1-201ENST00000358161 MT1AP04731 61 aa3.06□□□□□ -1.92
SPTAN1-201ENST00000358161 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
SPTAN1-201ENST00000358161 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
SPTAN1-201ENST00000358161 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
SPTAN1-201ENST00000358161 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
SPTAN1-201ENST00000358161 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
SPTAN1-201ENST00000358161 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SPTAN1-201ENST00000358161 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
SPTAN1-201ENST00000358161 ABCA13Q86UQ4 5058 aa3□□□□□ -1.93
SPTAN1-201ENST00000358161 RNF213Q63HN8 5207 aa2.98□□□□□ -1.93
SPTAN1-201ENST00000358161 PRM1P04553 51 aa2.97□□□□□ -1.93
SPTAN1-201ENST00000358161 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
SPTAN1-201ENST00000358161 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
SPTAN1-201ENST00000358161 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
SPTAN1-201ENST00000358161 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
SPTAN1-201ENST00000358161 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
SPTAN1-201ENST00000358161 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.95
SPTAN1-201ENST00000358161 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
SPTAN1-201ENST00000358161 UBR4Q5T4S7 5183 aa2.85□□□□□ -1.95
SPTAN1-201ENST00000358161 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.96
SPTAN1-201ENST00000358161 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.96
SPTAN1-201ENST00000358161 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
SPTAN1-201ENST00000358161 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
SPTAN1-201ENST00000358161 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
SPTAN1-201ENST00000358161 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
SPTAN1-201ENST00000358161 MUC2Q02817 5179 aa2.75□□□□□ -1.97
SPTAN1-201ENST00000358161 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
SPTAN1-201ENST00000358161 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
SPTAN1-201ENST00000358161 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
SPTAN1-201ENST00000358161 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
SPTAN1-201ENST00000358161 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
SPTAN1-201ENST00000358161 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
SPTAN1-201ENST00000358161 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2.01
SPTAN1-201ENST00000358161 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
SPTAN1-201ENST00000358161 USH2AO75445 5202 aa2.41□□□□□ -2.02
SPTAN1-201ENST00000358161 NEBP20929 6669 aa2.39□□□□□ -2.03
SPTAN1-201ENST00000358161 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
SPTAN1-201ENST00000358161 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
SPTAN1-201ENST00000358161 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-201ENST00000358161 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
SPTAN1-201ENST00000358161 KMT2DO14686 5537 aa2.34□□□□□ -2.03
SPTAN1-201ENST00000358161 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
SPTAN1-201ENST00000358161 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
SPTAN1-201ENST00000358161 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
SPTAN1-201ENST00000358161 KRTAP4-11Q9BYQ6 195 aa2.17□□□□□ -2.06
SPTAN1-201ENST00000358161 KRTAP5-5Q701N2 237 aaPredicted RBP2.13□□□□□ -2.07
SPTAN1-201ENST00000358161 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
SPTAN1-201ENST00000358161 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
SPTAN1-201ENST00000358161 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
SPTAN1-201ENST00000358161 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
SPTAN1-201ENST00000358161 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
SPTAN1-201ENST00000358161 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
SPTAN1-201ENST00000358161 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
SPTAN1-201ENST00000358161 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
SPTAN1-201ENST00000358161 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
SPTAN1-201ENST00000358161 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
SPTAN1-201ENST00000358161 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.13
SPTAN1-201ENST00000358161 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
SPTAN1-201ENST00000358161 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
SPTAN1-201ENST00000358161 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
SPTAN1-201ENST00000358161 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
SPTAN1-201ENST00000358161 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
SPTAN1-201ENST00000358161 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
SPTAN1-201ENST00000358161 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
SPTAN1-201ENST00000358161 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
SPTAN1-201ENST00000358161 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SPTAN1-201ENST00000358161 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
SPTAN1-201ENST00000358161 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
SPTAN1-201ENST00000358161 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
SPTAN1-201ENST00000358161 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 71.7 ms