RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
TRAPPC11-202ENST00000357207 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
TRAPPC11-202ENST00000357207 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
TRAPPC11-202ENST00000357207 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
TRAPPC11-202ENST00000357207 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
TRAPPC11-202ENST00000357207 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
TRAPPC11-202ENST00000357207 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
TRAPPC11-202ENST00000357207 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
TRAPPC11-202ENST00000357207 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
TRAPPC11-202ENST00000357207 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
TRAPPC11-202ENST00000357207 PRM1P04553 51 aa4.7□□□□□ -1.66
TRAPPC11-202ENST00000357207 MT3P25713 68 aa4.63□□□□□ -1.67
TRAPPC11-202ENST00000357207 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
TRAPPC11-202ENST00000357207 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
TRAPPC11-202ENST00000357207 MUC2Q02817 5179 aa4.6□□□□□ -1.67
TRAPPC11-202ENST00000357207 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-202ENST00000357207 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
TRAPPC11-202ENST00000357207 MT1AP04731 61 aa4.52□□□□□ -1.69
TRAPPC11-202ENST00000357207 LCE2DQ5TA82 110 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC11-202ENST00000357207 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
TRAPPC11-202ENST00000357207 MT4P47944 62 aa4.34□□□□□ -1.72
TRAPPC11-202ENST00000357207 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
TRAPPC11-202ENST00000357207 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
TRAPPC11-202ENST00000357207 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-202ENST00000357207 USH2AO75445 5202 aa4.28□□□□□ -1.72
TRAPPC11-202ENST00000357207 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
TRAPPC11-202ENST00000357207 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
TRAPPC11-202ENST00000357207 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
TRAPPC11-202ENST00000357207 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
TRAPPC11-202ENST00000357207 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
TRAPPC11-202ENST00000357207 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.74
TRAPPC11-202ENST00000357207 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
TRAPPC11-202ENST00000357207 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
TRAPPC11-202ENST00000357207 KMT2DO14686 5537 aa4.11□□□□□ -1.75
TRAPPC11-202ENST00000357207 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
TRAPPC11-202ENST00000357207 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
TRAPPC11-202ENST00000357207 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
TRAPPC11-202ENST00000357207 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
TRAPPC11-202ENST00000357207 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
TRAPPC11-202ENST00000357207 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
TRAPPC11-202ENST00000357207 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
TRAPPC11-202ENST00000357207 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
TRAPPC11-202ENST00000357207 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC11-202ENST00000357207 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
TRAPPC11-202ENST00000357207 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
TRAPPC11-202ENST00000357207 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
TRAPPC11-202ENST00000357207 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
TRAPPC11-202ENST00000357207 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC11-202ENST00000357207 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
TRAPPC11-202ENST00000357207 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
TRAPPC11-202ENST00000357207 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
TRAPPC11-202ENST00000357207 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
TRAPPC11-202ENST00000357207 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
TRAPPC11-202ENST00000357207 NEBP20929 6669 aa3.34□□□□□ -1.88
TRAPPC11-202ENST00000357207 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
TRAPPC11-202ENST00000357207 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
TRAPPC11-202ENST00000357207 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
TRAPPC11-202ENST00000357207 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
TRAPPC11-202ENST00000357207 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
TRAPPC11-202ENST00000357207 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
TRAPPC11-202ENST00000357207 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
TRAPPC11-202ENST00000357207 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
TRAPPC11-202ENST00000357207 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
TRAPPC11-202ENST00000357207 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.97
TRAPPC11-202ENST00000357207 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
TRAPPC11-202ENST00000357207 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
TRAPPC11-202ENST00000357207 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
TRAPPC11-202ENST00000357207 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC11-202ENST00000357207 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
TRAPPC11-202ENST00000357207 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
TRAPPC11-202ENST00000357207 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
TRAPPC11-202ENST00000357207 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
TRAPPC11-202ENST00000357207 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
TRAPPC11-202ENST00000357207 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC11-202ENST00000357207 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
TRAPPC11-202ENST00000357207 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
TRAPPC11-202ENST00000357207 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 71 ms