RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 KRTAP19-6Q3LI70 58 aa2.42□□□□□ -2.02
TNPO1-201ENST00000337273 LCE2DQ5TA82 110 aaPredicted RBP2.42□□□□□ -2.02
TNPO1-201ENST00000337273 KIAA1109Q2LD37 5005 aa2.41□□□□□ -2.02
TNPO1-201ENST00000337273 HERC2O95714 4834 aa2.41□□□□□ -2.02
TNPO1-201ENST00000337273 KRTAP19-2Q3LHN2 52 aa2.41□□□□□ -2.02
TNPO1-201ENST00000337273 LCE1DQ5T752 114 aa2.4□□□□□ -2.03
TNPO1-201ENST00000337273 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
TNPO1-201ENST00000337273 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
TNPO1-201ENST00000337273 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
TNPO1-201ENST00000337273 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
TNPO1-201ENST00000337273 MT1AP04731 61 aa2.35□□□□□ -2.03
TNPO1-201ENST00000337273 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
TNPO1-201ENST00000337273 LCE4AQ5TA78 99 aa2.28□□□□□ -2.04
TNPO1-201ENST00000337273 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
TNPO1-201ENST00000337273 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.05
TNPO1-201ENST00000337273 UBR4Q5T4S7 5183 aa2.25□□□□□ -2.05
TNPO1-201ENST00000337273 RNF213Q63HN8 5207 aa2.23□□□□□ -2.05
TNPO1-201ENST00000337273 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
TNPO1-201ENST00000337273 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
TNPO1-201ENST00000337273 LCE5AQ5TCM9 118 aa2.22□□□□□ -2.05
TNPO1-201ENST00000337273 KRTAP9-2Q9BYQ4 174 aa2.22□□□□□ -2.05
TNPO1-201ENST00000337273 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
TNPO1-201ENST00000337273 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
TNPO1-201ENST00000337273 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
TNPO1-201ENST00000337273 LCE2AQ5TA79 106 aaPredicted RBP2.16□□□□□ -2.06
TNPO1-201ENST00000337273 KRTAP9-4Q9BYQ2 154 aa2.16□□□□□ -2.06
TNPO1-201ENST00000337273 KRTAP9-6A0A140TA67 174 aa2.16□□□□□ -2.06
TNPO1-201ENST00000337273 EPPK1P58107 5090 aaKnown RBP2.16□□□□□ -2.06
TNPO1-201ENST00000337273 FSIP2Q5CZC0 6907 aa2.14□□□□□ -2.07
TNPO1-201ENST00000337273 HMCN2Q8NDA2 5059 aa2.13□□□□□ -2.07
TNPO1-201ENST00000337273 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
TNPO1-201ENST00000337273 FAT4Q6V0I7 4981 aa2.09□□□□□ -2.07
TNPO1-201ENST00000337273 KRTAP4-11Q9BYQ6 195 aa2.07□□□□□ -2.08
TNPO1-201ENST00000337273 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
TNPO1-201ENST00000337273 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
TNPO1-201ENST00000337273 MUC2Q02817 5179 aa2.03□□□□□ -2.08
TNPO1-201ENST00000337273 KRTAP20-1Q3LI63 56 aa2.02□□□□□ -2.09
TNPO1-201ENST00000337273 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
TNPO1-201ENST00000337273 USH2AO75445 5202 aa2.01□□□□□ -2.09
TNPO1-201ENST00000337273 KMT2DO14686 5537 aa2□□□□□ -2.09
TNPO1-201ENST00000337273 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
TNPO1-201ENST00000337273 OBSCNQ5VST9 7968 aa1.95□□□□□ -2.1
TNPO1-201ENST00000337273 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.1
TNPO1-201ENST00000337273 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.11
TNPO1-201ENST00000337273 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
TNPO1-201ENST00000337273 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
TNPO1-201ENST00000337273 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
TNPO1-201ENST00000337273 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
TNPO1-201ENST00000337273 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.12
TNPO1-201ENST00000337273 KRTAP4-6Q9BYQ5 205 aa1.83□□□□□ -2.12
TNPO1-201ENST00000337273 KRTAP9-9Q9BYP9 154 aa1.79□□□□□ -2.12
TNPO1-201ENST00000337273 KRTAP5-9P26371 169 aa1.77□□□□□ -2.13
TNPO1-201ENST00000337273 FCGBPQ9Y6R7 5405 aaPredicted RBP1.74□□□□□ -2.13
TNPO1-201ENST00000337273 NEBP20929 6669 aa1.69□□□□□ -2.14
TNPO1-201ENST00000337273 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
TNPO1-201ENST00000337273 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
TNPO1-201ENST00000337273 KRTAP5-4Q6L8H1 288 aa1.59□□□□□ -2.15
TNPO1-201ENST00000337273 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
TNPO1-201ENST00000337273 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
TNPO1-201ENST00000337273 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
TNPO1-201ENST00000337273 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
TNPO1-201ENST00000337273 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.2
TNPO1-201ENST00000337273 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
TNPO1-201ENST00000337273 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
TNPO1-201ENST00000337273 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
TNPO1-201ENST00000337273 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
TNPO1-201ENST00000337273 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
TNPO1-201ENST00000337273 KRTAP5-8O75690 187 aa1.17□□□□□ -2.22
TNPO1-201ENST00000337273 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
TNPO1-201ENST00000337273 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
TNPO1-201ENST00000337273 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
TNPO1-201ENST00000337273 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
TNPO1-201ENST00000337273 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.08□□□□□ -2.24
TNPO1-201ENST00000337273 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
TNPO1-201ENST00000337273 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
TNPO1-201ENST00000337273 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
TNPO1-201ENST00000337273 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 70.6 ms