RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 HSPG2P98160 4391 aa4.83□□□□□ -1.64
PTCH1-201ENST00000331920 HYDINQ4G0P3 5121 aa4.79□□□□□ -1.64
PTCH1-201ENST00000331920 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
PTCH1-201ENST00000331920 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
PTCH1-201ENST00000331920 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
PTCH1-201ENST00000331920 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
PTCH1-201ENST00000331920 KMT2CQ8NEZ4 4911 aaKnown RBP4.61□□□□□ -1.67
PTCH1-201ENST00000331920 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
PTCH1-201ENST00000331920 MUC17Q685J3 4493 aa4.59□□□□□ -1.68
PTCH1-201ENST00000331920 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
PTCH1-201ENST00000331920 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
PTCH1-201ENST00000331920 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
PTCH1-201ENST00000331920 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
PTCH1-201ENST00000331920 HERC2O95714 4834 aa4.55□□□□□ -1.68
PTCH1-201ENST00000331920 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
PTCH1-201ENST00000331920 MT1AP04731 61 aa4.45□□□□□ -1.7
PTCH1-201ENST00000331920 HERC1Q15751 4861 aa4.35□□□□□ -1.71
PTCH1-201ENST00000331920 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.72
PTCH1-201ENST00000331920 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
PTCH1-201ENST00000331920 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
PTCH1-201ENST00000331920 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
PTCH1-201ENST00000331920 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.74
PTCH1-201ENST00000331920 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
PTCH1-201ENST00000331920 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
PTCH1-201ENST00000331920 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
PTCH1-201ENST00000331920 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
PTCH1-201ENST00000331920 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
PTCH1-201ENST00000331920 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
PTCH1-201ENST00000331920 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
PTCH1-201ENST00000331920 EPPK1P58107 5090 aaKnown RBP4□□□□□ -1.77
PTCH1-201ENST00000331920 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
PTCH1-201ENST00000331920 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
PTCH1-201ENST00000331920 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
PTCH1-201ENST00000331920 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.77
PTCH1-201ENST00000331920 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
PTCH1-201ENST00000331920 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
PTCH1-201ENST00000331920 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
PTCH1-201ENST00000331920 MUC2Q02817 5179 aa3.88□□□□□ -1.79
PTCH1-201ENST00000331920 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
PTCH1-201ENST00000331920 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
PTCH1-201ENST00000331920 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.8
PTCH1-201ENST00000331920 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
PTCH1-201ENST00000331920 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
PTCH1-201ENST00000331920 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
PTCH1-201ENST00000331920 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
PTCH1-201ENST00000331920 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
PTCH1-201ENST00000331920 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.87
PTCH1-201ENST00000331920 KMT2DO14686 5537 aa3.39□□□□□ -1.87
PTCH1-201ENST00000331920 USH2AO75445 5202 aa3.35□□□□□ -1.87
PTCH1-201ENST00000331920 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
PTCH1-201ENST00000331920 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
PTCH1-201ENST00000331920 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
PTCH1-201ENST00000331920 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
PTCH1-201ENST00000331920 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
PTCH1-201ENST00000331920 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
PTCH1-201ENST00000331920 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
PTCH1-201ENST00000331920 NEBP20929 6669 aa2.92□□□□□ -1.94
PTCH1-201ENST00000331920 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
PTCH1-201ENST00000331920 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
PTCH1-201ENST00000331920 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
PTCH1-201ENST00000331920 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
PTCH1-201ENST00000331920 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
PTCH1-201ENST00000331920 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
PTCH1-201ENST00000331920 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
PTCH1-201ENST00000331920 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
PTCH1-201ENST00000331920 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
PTCH1-201ENST00000331920 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
PTCH1-201ENST00000331920 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
PTCH1-201ENST00000331920 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
PTCH1-201ENST00000331920 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
PTCH1-201ENST00000331920 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
PTCH1-201ENST00000331920 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
PTCH1-201ENST00000331920 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
PTCH1-201ENST00000331920 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
PTCH1-201ENST00000331920 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
PTCH1-201ENST00000331920 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
PTCH1-201ENST00000331920 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms