RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
MCF2L2-201ENST00000328913 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
MCF2L2-201ENST00000328913 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
MCF2L2-201ENST00000328913 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
MCF2L2-201ENST00000328913 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
MCF2L2-201ENST00000328913 MT1MQ8N339 61 aa4.95□□□□□ -1.62
MCF2L2-201ENST00000328913 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.62
MCF2L2-201ENST00000328913 MUC2Q02817 5179 aa4.85□□□□□ -1.63
MCF2L2-201ENST00000328913 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
MCF2L2-201ENST00000328913 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.64
MCF2L2-201ENST00000328913 PRM1P04553 51 aa4.81□□□□□ -1.64
MCF2L2-201ENST00000328913 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
MCF2L2-201ENST00000328913 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
MCF2L2-201ENST00000328913 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
MCF2L2-201ENST00000328913 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
MCF2L2-201ENST00000328913 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
MCF2L2-201ENST00000328913 MT3P25713 68 aa4.77□□□□□ -1.65
MCF2L2-201ENST00000328913 MT4P47944 62 aa4.77□□□□□ -1.65
MCF2L2-201ENST00000328913 MT1AP04731 61 aa4.61□□□□□ -1.67
MCF2L2-201ENST00000328913 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
MCF2L2-201ENST00000328913 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
MCF2L2-201ENST00000328913 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
MCF2L2-201ENST00000328913 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
MCF2L2-201ENST00000328913 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
MCF2L2-201ENST00000328913 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
MCF2L2-201ENST00000328913 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
MCF2L2-201ENST00000328913 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
MCF2L2-201ENST00000328913 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
MCF2L2-201ENST00000328913 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
MCF2L2-201ENST00000328913 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
MCF2L2-201ENST00000328913 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
MCF2L2-201ENST00000328913 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
MCF2L2-201ENST00000328913 USH2AO75445 5202 aa4.33□□□□□ -1.72
MCF2L2-201ENST00000328913 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
MCF2L2-201ENST00000328913 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
MCF2L2-201ENST00000328913 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
MCF2L2-201ENST00000328913 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
MCF2L2-201ENST00000328913 LCE4AQ5TA78 99 aa4.21□□□□□ -1.73
MCF2L2-201ENST00000328913 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
MCF2L2-201ENST00000328913 KMT2DO14686 5537 aa4.14□□□□□ -1.75
MCF2L2-201ENST00000328913 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
MCF2L2-201ENST00000328913 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
MCF2L2-201ENST00000328913 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
MCF2L2-201ENST00000328913 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
MCF2L2-201ENST00000328913 MDN1Q9NU22 5596 aa3.88□□□□□ -1.79
MCF2L2-201ENST00000328913 NEBP20929 6669 aa3.86□□□□□ -1.79
MCF2L2-201ENST00000328913 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
MCF2L2-201ENST00000328913 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
MCF2L2-201ENST00000328913 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
MCF2L2-201ENST00000328913 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
MCF2L2-201ENST00000328913 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
MCF2L2-201ENST00000328913 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
MCF2L2-201ENST00000328913 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
MCF2L2-201ENST00000328913 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
MCF2L2-201ENST00000328913 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
MCF2L2-201ENST00000328913 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
MCF2L2-201ENST00000328913 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
MCF2L2-201ENST00000328913 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
MCF2L2-201ENST00000328913 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
MCF2L2-201ENST00000328913 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
MCF2L2-201ENST00000328913 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
MCF2L2-201ENST00000328913 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
MCF2L2-201ENST00000328913 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
MCF2L2-201ENST00000328913 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
MCF2L2-201ENST00000328913 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
MCF2L2-201ENST00000328913 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
MCF2L2-201ENST00000328913 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.97
MCF2L2-201ENST00000328913 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
MCF2L2-201ENST00000328913 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
MCF2L2-201ENST00000328913 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
MCF2L2-201ENST00000328913 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
MCF2L2-201ENST00000328913 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
MCF2L2-201ENST00000328913 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
MCF2L2-201ENST00000328913 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
MCF2L2-201ENST00000328913 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
MCF2L2-201ENST00000328913 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
MCF2L2-201ENST00000328913 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 235 ms