RNA–Protein interactions for RNA: ENST00000320370.11

SSFA2-201, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSFA2, Length 4,965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-201ENST00000320370 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
SSFA2-201ENST00000320370 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
SSFA2-201ENST00000320370 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
SSFA2-201ENST00000320370 HMCN2Q8NDA2 5059 aa5.25□□□□□ -1.57
SSFA2-201ENST00000320370 MT1MQ8N339 61 aa5.25□□□□□ -1.57
SSFA2-201ENST00000320370 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
SSFA2-201ENST00000320370 LCE2DQ5TA82 110 aaPredicted RBP5.17□□□□□ -1.58
SSFA2-201ENST00000320370 KRTAP9-2Q9BYQ4 174 aa5.15□□□□□ -1.59
SSFA2-201ENST00000320370 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
SSFA2-201ENST00000320370 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
SSFA2-201ENST00000320370 MUC2Q02817 5179 aa5.11□□□□□ -1.59
SSFA2-201ENST00000320370 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
SSFA2-201ENST00000320370 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
SSFA2-201ENST00000320370 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
SSFA2-201ENST00000320370 MT3P25713 68 aa4.98□□□□□ -1.61
SSFA2-201ENST00000320370 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
SSFA2-201ENST00000320370 MT4P47944 62 aa4.93□□□□□ -1.62
SSFA2-201ENST00000320370 PRM1P04553 51 aa4.89□□□□□ -1.63
SSFA2-201ENST00000320370 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
SSFA2-201ENST00000320370 MT1AP04731 61 aa4.88□□□□□ -1.63
SSFA2-201ENST00000320370 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
SSFA2-201ENST00000320370 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
SSFA2-201ENST00000320370 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
SSFA2-201ENST00000320370 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
SSFA2-201ENST00000320370 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
SSFA2-201ENST00000320370 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
SSFA2-201ENST00000320370 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.65
SSFA2-201ENST00000320370 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
SSFA2-201ENST00000320370 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
SSFA2-201ENST00000320370 KRTAP6-3Q3LI67 103 aa4.65□□□□□ -1.66
SSFA2-201ENST00000320370 USH2AO75445 5202 aa4.61□□□□□ -1.67
SSFA2-201ENST00000320370 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
SSFA2-201ENST00000320370 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
SSFA2-201ENST00000320370 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
SSFA2-201ENST00000320370 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
SSFA2-201ENST00000320370 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.69
SSFA2-201ENST00000320370 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
SSFA2-201ENST00000320370 KMT2DO14686 5537 aa4.44□□□□□ -1.7
SSFA2-201ENST00000320370 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
SSFA2-201ENST00000320370 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
SSFA2-201ENST00000320370 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
SSFA2-201ENST00000320370 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
SSFA2-201ENST00000320370 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
SSFA2-201ENST00000320370 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
SSFA2-201ENST00000320370 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
SSFA2-201ENST00000320370 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
SSFA2-201ENST00000320370 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
SSFA2-201ENST00000320370 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
SSFA2-201ENST00000320370 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
SSFA2-201ENST00000320370 NEBP20929 6669 aa3.89□□□□□ -1.79
SSFA2-201ENST00000320370 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
SSFA2-201ENST00000320370 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
SSFA2-201ENST00000320370 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
SSFA2-201ENST00000320370 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
SSFA2-201ENST00000320370 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
SSFA2-201ENST00000320370 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SSFA2-201ENST00000320370 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
SSFA2-201ENST00000320370 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SSFA2-201ENST00000320370 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
SSFA2-201ENST00000320370 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
SSFA2-201ENST00000320370 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
SSFA2-201ENST00000320370 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
SSFA2-201ENST00000320370 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
SSFA2-201ENST00000320370 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
SSFA2-201ENST00000320370 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
SSFA2-201ENST00000320370 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
SSFA2-201ENST00000320370 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
SSFA2-201ENST00000320370 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
SSFA2-201ENST00000320370 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
SSFA2-201ENST00000320370 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
SSFA2-201ENST00000320370 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
SSFA2-201ENST00000320370 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
SSFA2-201ENST00000320370 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
SSFA2-201ENST00000320370 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
SSFA2-201ENST00000320370 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SSFA2-201ENST00000320370 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
SSFA2-201ENST00000320370 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 93.7 ms