RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 KRTAP19-6Q3LI70 58 aa3.03□□□□□ -1.92
CTC1-201ENST00000315684 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
CTC1-201ENST00000315684 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
CTC1-201ENST00000315684 FAT4Q6V0I7 4981 aa2.99□□□□□ -1.93
CTC1-201ENST00000315684 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
CTC1-201ENST00000315684 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
CTC1-201ENST00000315684 MT1EP04732 61 aa2.96□□□□□ -1.93
CTC1-201ENST00000315684 MT1LQ93083 61 aa2.95□□□□□ -1.94
CTC1-201ENST00000315684 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
CTC1-201ENST00000315684 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
CTC1-201ENST00000315684 HMCN2Q8NDA2 5059 aa2.9□□□□□ -1.95
CTC1-201ENST00000315684 MT1MQ8N339 61 aa2.9□□□□□ -1.95
CTC1-201ENST00000315684 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
CTC1-201ENST00000315684 MUC2Q02817 5179 aa2.88□□□□□ -1.95
CTC1-201ENST00000315684 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
CTC1-201ENST00000315684 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
CTC1-201ENST00000315684 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
CTC1-201ENST00000315684 RNF213Q63HN8 5207 aa2.84□□□□□ -1.95
CTC1-201ENST00000315684 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
CTC1-201ENST00000315684 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
CTC1-201ENST00000315684 KRTAP2-4Q9BYR9 128 aa2.78□□□□□ -1.96
CTC1-201ENST00000315684 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
CTC1-201ENST00000315684 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
CTC1-201ENST00000315684 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
CTC1-201ENST00000315684 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
CTC1-201ENST00000315684 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
CTC1-201ENST00000315684 LCE1AQ5T7P2 110 aa2.66□□□□□ -1.98
CTC1-201ENST00000315684 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
CTC1-201ENST00000315684 MT1AP04731 61 aa2.57□□□□□ -2
CTC1-201ENST00000315684 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
CTC1-201ENST00000315684 KMT2DO14686 5537 aa2.55□□□□□ -2
CTC1-201ENST00000315684 LCE4AQ5TA78 99 aa2.54□□□□□ -2
CTC1-201ENST00000315684 PRM1P04553 51 aa2.54□□□□□ -2
CTC1-201ENST00000315684 MACF1Q9UPN3 7388 aaKnown RBP2.54□□□□□ -2
CTC1-201ENST00000315684 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
CTC1-201ENST00000315684 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
CTC1-201ENST00000315684 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
CTC1-201ENST00000315684 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
CTC1-201ENST00000315684 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
CTC1-201ENST00000315684 KRTAP9-4Q9BYQ2 154 aa2.45□□□□□ -2.02
CTC1-201ENST00000315684 USH2AO75445 5202 aa2.43□□□□□ -2.02
CTC1-201ENST00000315684 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
CTC1-201ENST00000315684 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
CTC1-201ENST00000315684 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
CTC1-201ENST00000315684 FCGBPQ9Y6R7 5405 aaPredicted RBP2.36□□□□□ -2.03
CTC1-201ENST00000315684 NEBP20929 6669 aa2.35□□□□□ -2.03
CTC1-201ENST00000315684 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
CTC1-201ENST00000315684 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
CTC1-201ENST00000315684 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
CTC1-201ENST00000315684 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
CTC1-201ENST00000315684 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
CTC1-201ENST00000315684 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
CTC1-201ENST00000315684 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
CTC1-201ENST00000315684 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
CTC1-201ENST00000315684 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
CTC1-201ENST00000315684 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
CTC1-201ENST00000315684 KRTAP4-11Q9BYQ6 195 aa2.01□□□□□ -2.09
CTC1-201ENST00000315684 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
CTC1-201ENST00000315684 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
CTC1-201ENST00000315684 KRTAP5-3Q6L8H2 238 aa1.91□□□□□ -2.1
CTC1-201ENST00000315684 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
CTC1-201ENST00000315684 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
CTC1-201ENST00000315684 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
CTC1-201ENST00000315684 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
CTC1-201ENST00000315684 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
CTC1-201ENST00000315684 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CTC1-201ENST00000315684 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
CTC1-201ENST00000315684 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
CTC1-201ENST00000315684 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
CTC1-201ENST00000315684 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
CTC1-201ENST00000315684 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
CTC1-201ENST00000315684 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
CTC1-201ENST00000315684 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
CTC1-201ENST00000315684 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CTC1-201ENST00000315684 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
CTC1-201ENST00000315684 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.09□□□□□ -2.23
CTC1-201ENST00000315684 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms