RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 MUC2Q02817 5179 aa2.67□□□□□ -1.98
ERCC4-201ENST00000311895 MT4P47944 62 aa2.65□□□□□ -1.99
ERCC4-201ENST00000311895 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
ERCC4-201ENST00000311895 HMCN2Q8NDA2 5059 aa2.64□□□□□ -1.99
ERCC4-201ENST00000311895 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
ERCC4-201ENST00000311895 MT1MQ8N339 61 aa2.61□□□□□ -1.99
ERCC4-201ENST00000311895 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
ERCC4-201ENST00000311895 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
ERCC4-201ENST00000311895 KRTAP4-9Q9BYQ8 210 aa2.57□□□□□ -2
ERCC4-201ENST00000311895 MT3P25713 68 aa2.56□□□□□ -2
ERCC4-201ENST00000311895 LCE1DQ5T752 114 aa2.55□□□□□ -2
ERCC4-201ENST00000311895 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
ERCC4-201ENST00000311895 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
ERCC4-201ENST00000311895 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
ERCC4-201ENST00000311895 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
ERCC4-201ENST00000311895 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
ERCC4-201ENST00000311895 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
ERCC4-201ENST00000311895 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
ERCC4-201ENST00000311895 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
ERCC4-201ENST00000311895 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
ERCC4-201ENST00000311895 KRTAP9-2Q9BYQ4 174 aa2.44□□□□□ -2.02
ERCC4-201ENST00000311895 MT1AP04731 61 aa2.39□□□□□ -2.03
ERCC4-201ENST00000311895 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
ERCC4-201ENST00000311895 LCE2AQ5TA79 106 aaPredicted RBP2.37□□□□□ -2.03
ERCC4-201ENST00000311895 KMT2DO14686 5537 aa2.34□□□□□ -2.04
ERCC4-201ENST00000311895 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.04
ERCC4-201ENST00000311895 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
ERCC4-201ENST00000311895 USH2AO75445 5202 aa2.31□□□□□ -2.04
ERCC4-201ENST00000311895 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
ERCC4-201ENST00000311895 KRTAP9-7A8MTY7 169 aa2.29□□□□□ -2.04
ERCC4-201ENST00000311895 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
ERCC4-201ENST00000311895 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
ERCC4-201ENST00000311895 KRTAP9-6A0A140TA67 174 aa2.24□□□□□ -2.05
ERCC4-201ENST00000311895 KRTAP9-4Q9BYQ2 154 aa2.24□□□□□ -2.05
ERCC4-201ENST00000311895 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
ERCC4-201ENST00000311895 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
ERCC4-201ENST00000311895 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
ERCC4-201ENST00000311895 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
ERCC4-201ENST00000311895 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
ERCC4-201ENST00000311895 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
ERCC4-201ENST00000311895 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
ERCC4-201ENST00000311895 LCE4AQ5TA78 99 aa2.09□□□□□ -2.08
ERCC4-201ENST00000311895 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.08□□□□□ -2.08
ERCC4-201ENST00000311895 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
ERCC4-201ENST00000311895 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
ERCC4-201ENST00000311895 KRTAP4-11Q9BYQ6 195 aa2.01□□□□□ -2.09
ERCC4-201ENST00000311895 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
ERCC4-201ENST00000311895 KRTAP4-6Q9BYQ5 205 aa1.91□□□□□ -2.1
ERCC4-201ENST00000311895 KRTAP9-9Q9BYP9 154 aa1.89□□□□□ -2.11
ERCC4-201ENST00000311895 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
ERCC4-201ENST00000311895 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
ERCC4-201ENST00000311895 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
ERCC4-201ENST00000311895 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
ERCC4-201ENST00000311895 KRTAP4-12Q9BQ66 201 aa1.8□□□□□ -2.12
ERCC4-201ENST00000311895 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
ERCC4-201ENST00000311895 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
ERCC4-201ENST00000311895 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
ERCC4-201ENST00000311895 NEBP20929 6669 aa1.76□□□□□ -2.13
ERCC4-201ENST00000311895 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
ERCC4-201ENST00000311895 KRTAP5-4Q6L8H1 288 aa1.6□□□□□ -2.15
ERCC4-201ENST00000311895 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
ERCC4-201ENST00000311895 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
ERCC4-201ENST00000311895 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
ERCC4-201ENST00000311895 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
ERCC4-201ENST00000311895 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
ERCC4-201ENST00000311895 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
ERCC4-201ENST00000311895 KRTAP5-2Q701N4 177 aa1.37□□□□□ -2.19
ERCC4-201ENST00000311895 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
ERCC4-201ENST00000311895 KRTAP5-8O75690 187 aa1.33□□□□□ -2.2
ERCC4-201ENST00000311895 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
ERCC4-201ENST00000311895 KRTAP5-1Q6L8H4 278 aa1.22□□□□□ -2.21
ERCC4-201ENST00000311895 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
ERCC4-201ENST00000311895 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
ERCC4-201ENST00000311895 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
ERCC4-201ENST00000311895 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.23
ERCC4-201ENST00000311895 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
ERCC4-201ENST00000311895 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 172 ms