RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
MTCL1-201ENST00000306329 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
MTCL1-201ENST00000306329 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
MTCL1-201ENST00000306329 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
MTCL1-201ENST00000306329 EPPK1P58107 5090 aaKnown RBP6.07□□□□□ -1.44
MTCL1-201ENST00000306329 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
MTCL1-201ENST00000306329 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
MTCL1-201ENST00000306329 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
MTCL1-201ENST00000306329 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
MTCL1-201ENST00000306329 MT1AP04731 61 aa5.9□□□□□ -1.47
MTCL1-201ENST00000306329 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
MTCL1-201ENST00000306329 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
MTCL1-201ENST00000306329 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
MTCL1-201ENST00000306329 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
MTCL1-201ENST00000306329 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
MTCL1-201ENST00000306329 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
MTCL1-201ENST00000306329 HMCN2Q8NDA2 5059 aa5.77□□□□□ -1.49
MTCL1-201ENST00000306329 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
MTCL1-201ENST00000306329 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
MTCL1-201ENST00000306329 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
MTCL1-201ENST00000306329 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
MTCL1-201ENST00000306329 LCE2AQ5TA79 106 aaPredicted RBP5.58□□□□□ -1.52
MTCL1-201ENST00000306329 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
MTCL1-201ENST00000306329 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
MTCL1-201ENST00000306329 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
MTCL1-201ENST00000306329 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
MTCL1-201ENST00000306329 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
MTCL1-201ENST00000306329 MUC2Q02817 5179 aa5.48□□□□□ -1.53
MTCL1-201ENST00000306329 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
MTCL1-201ENST00000306329 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
MTCL1-201ENST00000306329 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
MTCL1-201ENST00000306329 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.55
MTCL1-201ENST00000306329 LCE1CQ5T751 118 aa5.37□□□□□ -1.55
MTCL1-201ENST00000306329 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
MTCL1-201ENST00000306329 LCE1FQ5T754 118 aa5.37□□□□□ -1.55
MTCL1-201ENST00000306329 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
MTCL1-201ENST00000306329 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
MTCL1-201ENST00000306329 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
MTCL1-201ENST00000306329 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
MTCL1-201ENST00000306329 KMT2DO14686 5537 aa4.91□□□□□ -1.62
MTCL1-201ENST00000306329 USH2AO75445 5202 aa4.84□□□□□ -1.63
MTCL1-201ENST00000306329 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
MTCL1-201ENST00000306329 KRTAP9-9Q9BYP9 154 aa4.82□□□□□ -1.64
MTCL1-201ENST00000306329 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
MTCL1-201ENST00000306329 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
MTCL1-201ENST00000306329 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
MTCL1-201ENST00000306329 NEBP20929 6669 aa4.47□□□□□ -1.69
MTCL1-201ENST00000306329 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
MTCL1-201ENST00000306329 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
MTCL1-201ENST00000306329 MUC19Q7Z5P9 8384 aa4.42□□□□□ -1.7
MTCL1-201ENST00000306329 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
MTCL1-201ENST00000306329 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
MTCL1-201ENST00000306329 KRTAP5-9P26371 169 aa4.34□□□□□ -1.72
MTCL1-201ENST00000306329 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
MTCL1-201ENST00000306329 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
MTCL1-201ENST00000306329 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
MTCL1-201ENST00000306329 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
MTCL1-201ENST00000306329 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
MTCL1-201ENST00000306329 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
MTCL1-201ENST00000306329 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
MTCL1-201ENST00000306329 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
MTCL1-201ENST00000306329 KRTAP5-3Q6L8H2 238 aa3.46□□□□□ -1.86
MTCL1-201ENST00000306329 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
MTCL1-201ENST00000306329 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
MTCL1-201ENST00000306329 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
MTCL1-201ENST00000306329 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
MTCL1-201ENST00000306329 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
MTCL1-201ENST00000306329 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
MTCL1-201ENST00000306329 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
MTCL1-201ENST00000306329 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
MTCL1-201ENST00000306329 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
MTCL1-201ENST00000306329 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
MTCL1-201ENST00000306329 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
MTCL1-201ENST00000306329 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
MTCL1-201ENST00000306329 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
MTCL1-201ENST00000306329 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
MTCL1-201ENST00000306329 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms