RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
PRPF8-201ENST00000304992 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
PRPF8-201ENST00000304992 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.9
PRPF8-201ENST00000304992 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.9
PRPF8-201ENST00000304992 MT3P25713 68 aa3.14□□□□□ -1.91
PRPF8-201ENST00000304992 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
PRPF8-201ENST00000304992 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
PRPF8-201ENST00000304992 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
PRPF8-201ENST00000304992 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
PRPF8-201ENST00000304992 LCE2AQ5TA79 106 aaPredicted RBP3.08□□□□□ -1.92
PRPF8-201ENST00000304992 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
PRPF8-201ENST00000304992 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
PRPF8-201ENST00000304992 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
PRPF8-201ENST00000304992 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
PRPF8-201ENST00000304992 PRM1P04553 51 aa3.02□□□□□ -1.93
PRPF8-201ENST00000304992 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
PRPF8-201ENST00000304992 MUC2Q02817 5179 aa3□□□□□ -1.93
PRPF8-201ENST00000304992 HMCN2Q8NDA2 5059 aa2.99□□□□□ -1.93
PRPF8-201ENST00000304992 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
PRPF8-201ENST00000304992 KRTAP4-9Q9BYQ8 210 aa2.97□□□□□ -1.93
PRPF8-201ENST00000304992 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
PRPF8-201ENST00000304992 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.94
PRPF8-201ENST00000304992 MT1AP04731 61 aa2.92□□□□□ -1.94
PRPF8-201ENST00000304992 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
PRPF8-201ENST00000304992 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
PRPF8-201ENST00000304992 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
PRPF8-201ENST00000304992 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.87□□□□□ -1.95
PRPF8-201ENST00000304992 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
PRPF8-201ENST00000304992 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
PRPF8-201ENST00000304992 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
PRPF8-201ENST00000304992 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
PRPF8-201ENST00000304992 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
PRPF8-201ENST00000304992 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
PRPF8-201ENST00000304992 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
PRPF8-201ENST00000304992 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
PRPF8-201ENST00000304992 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
PRPF8-201ENST00000304992 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
PRPF8-201ENST00000304992 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
PRPF8-201ENST00000304992 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
PRPF8-201ENST00000304992 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.99
PRPF8-201ENST00000304992 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
PRPF8-201ENST00000304992 USH2AO75445 5202 aa2.58□□□□□ -2
PRPF8-201ENST00000304992 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
PRPF8-201ENST00000304992 KMT2DO14686 5537 aa2.54□□□□□ -2
PRPF8-201ENST00000304992 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
PRPF8-201ENST00000304992 NEBP20929 6669 aa2.42□□□□□ -2.02
PRPF8-201ENST00000304992 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
PRPF8-201ENST00000304992 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
PRPF8-201ENST00000304992 SSPOA2VEC9 5147 aa2.34□□□□□ -2.04
PRPF8-201ENST00000304992 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
PRPF8-201ENST00000304992 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
PRPF8-201ENST00000304992 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
PRPF8-201ENST00000304992 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
PRPF8-201ENST00000304992 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
PRPF8-201ENST00000304992 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
PRPF8-201ENST00000304992 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
PRPF8-201ENST00000304992 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
PRPF8-201ENST00000304992 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
PRPF8-201ENST00000304992 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
PRPF8-201ENST00000304992 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
PRPF8-201ENST00000304992 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
PRPF8-201ENST00000304992 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
PRPF8-201ENST00000304992 KRTAP5-8O75690 187 aa1.78□□□□□ -2.13
PRPF8-201ENST00000304992 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
PRPF8-201ENST00000304992 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
PRPF8-201ENST00000304992 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
PRPF8-201ENST00000304992 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
PRPF8-201ENST00000304992 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
PRPF8-201ENST00000304992 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
PRPF8-201ENST00000304992 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
PRPF8-201ENST00000304992 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
PRPF8-201ENST00000304992 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
PRPF8-201ENST00000304992 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
PRPF8-201ENST00000304992 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
PRPF8-201ENST00000304992 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.16□□□□□ -2.22
PRPF8-201ENST00000304992 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
PRPF8-201ENST00000304992 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 78.3 ms