RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 PRM1P04553 51 aa5.16□□□□□ -1.58
PDS5A-201ENST00000303538 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
PDS5A-201ENST00000303538 KIAA1109Q2LD37 5005 aa5.1□□□□□ -1.59
PDS5A-201ENST00000303538 HERC2O95714 4834 aa5.02□□□□□ -1.61
PDS5A-201ENST00000303538 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
PDS5A-201ENST00000303538 RYR2Q92736 4967 aa4.97□□□□□ -1.61
PDS5A-201ENST00000303538 HERC1Q15751 4861 aa4.95□□□□□ -1.62
PDS5A-201ENST00000303538 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
PDS5A-201ENST00000303538 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
PDS5A-201ENST00000303538 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
PDS5A-201ENST00000303538 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
PDS5A-201ENST00000303538 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
PDS5A-201ENST00000303538 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
PDS5A-201ENST00000303538 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
PDS5A-201ENST00000303538 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
PDS5A-201ENST00000303538 KMT2CQ8NEZ4 4911 aaKnown RBP4.85□□□□□ -1.63
PDS5A-201ENST00000303538 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
PDS5A-201ENST00000303538 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
PDS5A-201ENST00000303538 EPPK1P58107 5090 aaKnown RBP4.83□□□□□ -1.64
PDS5A-201ENST00000303538 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
PDS5A-201ENST00000303538 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
PDS5A-201ENST00000303538 MT1AP04731 61 aa4.74□□□□□ -1.65
PDS5A-201ENST00000303538 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
PDS5A-201ENST00000303538 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
PDS5A-201ENST00000303538 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.66
PDS5A-201ENST00000303538 LCE2AQ5TA79 106 aaPredicted RBP4.64□□□□□ -1.67
PDS5A-201ENST00000303538 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
PDS5A-201ENST00000303538 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
PDS5A-201ENST00000303538 MUC2Q02817 5179 aa4.52□□□□□ -1.69
PDS5A-201ENST00000303538 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
PDS5A-201ENST00000303538 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
PDS5A-201ENST00000303538 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
PDS5A-201ENST00000303538 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
PDS5A-201ENST00000303538 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
PDS5A-201ENST00000303538 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
PDS5A-201ENST00000303538 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.71
PDS5A-201ENST00000303538 UBR4Q5T4S7 5183 aa4.34□□□□□ -1.72
PDS5A-201ENST00000303538 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
PDS5A-201ENST00000303538 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
PDS5A-201ENST00000303538 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
PDS5A-201ENST00000303538 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
PDS5A-201ENST00000303538 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
PDS5A-201ENST00000303538 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
PDS5A-201ENST00000303538 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
PDS5A-201ENST00000303538 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
PDS5A-201ENST00000303538 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
PDS5A-201ENST00000303538 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
PDS5A-201ENST00000303538 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
PDS5A-201ENST00000303538 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
PDS5A-201ENST00000303538 USH2AO75445 5202 aa3.76□□□□□ -1.81
PDS5A-201ENST00000303538 KMT2DO14686 5537 aa3.73□□□□□ -1.81
PDS5A-201ENST00000303538 NEBP20929 6669 aa3.71□□□□□ -1.82
PDS5A-201ENST00000303538 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
PDS5A-201ENST00000303538 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
PDS5A-201ENST00000303538 SSPOA2VEC9 5147 aa3.4□□□□□ -1.86
PDS5A-201ENST00000303538 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
PDS5A-201ENST00000303538 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
PDS5A-201ENST00000303538 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
PDS5A-201ENST00000303538 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
PDS5A-201ENST00000303538 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
PDS5A-201ENST00000303538 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
PDS5A-201ENST00000303538 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
PDS5A-201ENST00000303538 MUC5ACP98088 5654 aa2.9□□□□□ -1.94
PDS5A-201ENST00000303538 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
PDS5A-201ENST00000303538 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
PDS5A-201ENST00000303538 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
PDS5A-201ENST00000303538 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
PDS5A-201ENST00000303538 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
PDS5A-201ENST00000303538 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
PDS5A-201ENST00000303538 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PDS5A-201ENST00000303538 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
PDS5A-201ENST00000303538 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
PDS5A-201ENST00000303538 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
PDS5A-201ENST00000303538 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
PDS5A-201ENST00000303538 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
PDS5A-201ENST00000303538 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
PDS5A-201ENST00000303538 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms