RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 MT3P25713 68 aa4.25□□□□□ -1.73
PRKCB-201ENST00000303531 PRM1P04553 51 aa4.23□□□□□ -1.73
PRKCB-201ENST00000303531 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
PRKCB-201ENST00000303531 MT4P47944 62 aa4.2□□□□□ -1.74
PRKCB-201ENST00000303531 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
PRKCB-201ENST00000303531 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
PRKCB-201ENST00000303531 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
PRKCB-201ENST00000303531 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
PRKCB-201ENST00000303531 HMCN2Q8NDA2 5059 aa4.07□□□□□ -1.76
PRKCB-201ENST00000303531 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
PRKCB-201ENST00000303531 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
PRKCB-201ENST00000303531 RNF213Q63HN8 5207 aa4.06□□□□□ -1.76
PRKCB-201ENST00000303531 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
PRKCB-201ENST00000303531 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
PRKCB-201ENST00000303531 MT1AP04731 61 aa4.04□□□□□ -1.76
PRKCB-201ENST00000303531 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
PRKCB-201ENST00000303531 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
PRKCB-201ENST00000303531 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
PRKCB-201ENST00000303531 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
PRKCB-201ENST00000303531 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
PRKCB-201ENST00000303531 MUC2Q02817 5179 aa3.89□□□□□ -1.79
PRKCB-201ENST00000303531 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
PRKCB-201ENST00000303531 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
PRKCB-201ENST00000303531 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
PRKCB-201ENST00000303531 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
PRKCB-201ENST00000303531 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
PRKCB-201ENST00000303531 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
PRKCB-201ENST00000303531 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
PRKCB-201ENST00000303531 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
PRKCB-201ENST00000303531 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
PRKCB-201ENST00000303531 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
PRKCB-201ENST00000303531 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
PRKCB-201ENST00000303531 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
PRKCB-201ENST00000303531 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
PRKCB-201ENST00000303531 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
PRKCB-201ENST00000303531 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
PRKCB-201ENST00000303531 USH2AO75445 5202 aa3.49□□□□□ -1.85
PRKCB-201ENST00000303531 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
PRKCB-201ENST00000303531 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
PRKCB-201ENST00000303531 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
PRKCB-201ENST00000303531 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
PRKCB-201ENST00000303531 KMT2DO14686 5537 aa3.37□□□□□ -1.87
PRKCB-201ENST00000303531 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
PRKCB-201ENST00000303531 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
PRKCB-201ENST00000303531 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
PRKCB-201ENST00000303531 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
PRKCB-201ENST00000303531 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
PRKCB-201ENST00000303531 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
PRKCB-201ENST00000303531 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
PRKCB-201ENST00000303531 NEBP20929 6669 aa3.09□□□□□ -1.91
PRKCB-201ENST00000303531 MUC12Q9UKN1 5478 aa3.08□□□□□ -1.92
PRKCB-201ENST00000303531 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
PRKCB-201ENST00000303531 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
PRKCB-201ENST00000303531 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
PRKCB-201ENST00000303531 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
PRKCB-201ENST00000303531 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
PRKCB-201ENST00000303531 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
PRKCB-201ENST00000303531 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
PRKCB-201ENST00000303531 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
PRKCB-201ENST00000303531 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
PRKCB-201ENST00000303531 MUC5ACP98088 5654 aa2.53□□□□□ -2
PRKCB-201ENST00000303531 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
PRKCB-201ENST00000303531 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
PRKCB-201ENST00000303531 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
PRKCB-201ENST00000303531 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
PRKCB-201ENST00000303531 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
PRKCB-201ENST00000303531 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
PRKCB-201ENST00000303531 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
PRKCB-201ENST00000303531 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
PRKCB-201ENST00000303531 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
PRKCB-201ENST00000303531 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
PRKCB-201ENST00000303531 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
PRKCB-201ENST00000303531 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
PRKCB-201ENST00000303531 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
PRKCB-201ENST00000303531 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
PRKCB-201ENST00000303531 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
PRKCB-201ENST00000303531 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 80.6 ms