RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 LCE2AQ5TA79 106 aaPredicted RBP5.1□□□□□ -1.59
BRD3-201ENST00000303407 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
BRD3-201ENST00000303407 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
BRD3-201ENST00000303407 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
BRD3-201ENST00000303407 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
BRD3-201ENST00000303407 LCE2DQ5TA82 110 aaPredicted RBP5□□□□□ -1.61
BRD3-201ENST00000303407 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
BRD3-201ENST00000303407 MT3P25713 68 aa4.89□□□□□ -1.63
BRD3-201ENST00000303407 MT4P47944 62 aa4.84□□□□□ -1.63
BRD3-201ENST00000303407 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
BRD3-201ENST00000303407 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
BRD3-201ENST00000303407 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
BRD3-201ENST00000303407 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
BRD3-201ENST00000303407 PRM1P04553 51 aa4.82□□□□□ -1.64
BRD3-201ENST00000303407 MT1AP04731 61 aa4.77□□□□□ -1.65
BRD3-201ENST00000303407 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
BRD3-201ENST00000303407 MUC2Q02817 5179 aa4.74□□□□□ -1.65
BRD3-201ENST00000303407 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
BRD3-201ENST00000303407 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
BRD3-201ENST00000303407 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
BRD3-201ENST00000303407 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
BRD3-201ENST00000303407 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
BRD3-201ENST00000303407 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
BRD3-201ENST00000303407 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
BRD3-201ENST00000303407 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
BRD3-201ENST00000303407 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
BRD3-201ENST00000303407 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
BRD3-201ENST00000303407 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
BRD3-201ENST00000303407 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
BRD3-201ENST00000303407 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
BRD3-201ENST00000303407 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.72
BRD3-201ENST00000303407 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
BRD3-201ENST00000303407 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
BRD3-201ENST00000303407 USH2AO75445 5202 aa4.26□□□□□ -1.73
BRD3-201ENST00000303407 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
BRD3-201ENST00000303407 KMT2DO14686 5537 aa4.22□□□□□ -1.73
BRD3-201ENST00000303407 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
BRD3-201ENST00000303407 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
BRD3-201ENST00000303407 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
BRD3-201ENST00000303407 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
BRD3-201ENST00000303407 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.77
BRD3-201ENST00000303407 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
BRD3-201ENST00000303407 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
BRD3-201ENST00000303407 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
BRD3-201ENST00000303407 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
BRD3-201ENST00000303407 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
BRD3-201ENST00000303407 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
BRD3-201ENST00000303407 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
BRD3-201ENST00000303407 NEBP20929 6669 aa3.71□□□□□ -1.81
BRD3-201ENST00000303407 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
BRD3-201ENST00000303407 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
BRD3-201ENST00000303407 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
BRD3-201ENST00000303407 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
BRD3-201ENST00000303407 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
BRD3-201ENST00000303407 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
BRD3-201ENST00000303407 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
BRD3-201ENST00000303407 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
BRD3-201ENST00000303407 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
BRD3-201ENST00000303407 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
BRD3-201ENST00000303407 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
BRD3-201ENST00000303407 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
BRD3-201ENST00000303407 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
BRD3-201ENST00000303407 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
BRD3-201ENST00000303407 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
BRD3-201ENST00000303407 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
BRD3-201ENST00000303407 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
BRD3-201ENST00000303407 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
BRD3-201ENST00000303407 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
BRD3-201ENST00000303407 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
BRD3-201ENST00000303407 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
BRD3-201ENST00000303407 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
BRD3-201ENST00000303407 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
BRD3-201ENST00000303407 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
BRD3-201ENST00000303407 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
BRD3-201ENST00000303407 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
BRD3-201ENST00000303407 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
BRD3-201ENST00000303407 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 69 ms