RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 MUC2Q02817 5179 aa3.74□□□□□ -1.81
SNRK-201ENST00000296088 MT1MQ8N339 61 aa3.73□□□□□ -1.81
SNRK-201ENST00000296088 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
SNRK-201ENST00000296088 MT1AP04731 61 aa3.64□□□□□ -1.83
SNRK-201ENST00000296088 FAT4Q6V0I7 4981 aa3.63□□□□□ -1.83
SNRK-201ENST00000296088 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
SNRK-201ENST00000296088 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
SNRK-201ENST00000296088 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
SNRK-201ENST00000296088 UBR4Q5T4S7 5183 aa3.63□□□□□ -1.83
SNRK-201ENST00000296088 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
SNRK-201ENST00000296088 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
SNRK-201ENST00000296088 HMCN2Q8NDA2 5059 aa3.58□□□□□ -1.84
SNRK-201ENST00000296088 LOC100996750A0A140TA64 210 aa3.57□□□□□ -1.84
SNRK-201ENST00000296088 MT4P47944 62 aa3.53□□□□□ -1.84
SNRK-201ENST00000296088 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
SNRK-201ENST00000296088 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
SNRK-201ENST00000296088 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
SNRK-201ENST00000296088 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
SNRK-201ENST00000296088 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
SNRK-201ENST00000296088 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
SNRK-201ENST00000296088 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
SNRK-201ENST00000296088 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
SNRK-201ENST00000296088 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
SNRK-201ENST00000296088 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.88
SNRK-201ENST00000296088 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
SNRK-201ENST00000296088 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
SNRK-201ENST00000296088 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
SNRK-201ENST00000296088 LCE2AQ5TA79 106 aaPredicted RBP3.25□□□□□ -1.89
SNRK-201ENST00000296088 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
SNRK-201ENST00000296088 USH2AO75445 5202 aa3.23□□□□□ -1.89
SNRK-201ENST00000296088 KMT2DO14686 5537 aa3.22□□□□□ -1.89
SNRK-201ENST00000296088 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
SNRK-201ENST00000296088 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
SNRK-201ENST00000296088 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
SNRK-201ENST00000296088 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
SNRK-201ENST00000296088 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
SNRK-201ENST00000296088 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
SNRK-201ENST00000296088 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
SNRK-201ENST00000296088 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.9
SNRK-201ENST00000296088 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
SNRK-201ENST00000296088 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
SNRK-201ENST00000296088 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
SNRK-201ENST00000296088 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
SNRK-201ENST00000296088 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
SNRK-201ENST00000296088 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
SNRK-201ENST00000296088 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
SNRK-201ENST00000296088 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
SNRK-201ENST00000296088 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
SNRK-201ENST00000296088 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.96
SNRK-201ENST00000296088 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
SNRK-201ENST00000296088 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
SNRK-201ENST00000296088 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
SNRK-201ENST00000296088 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
SNRK-201ENST00000296088 NEBP20929 6669 aa2.51□□□□□ -2.01
SNRK-201ENST00000296088 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
SNRK-201ENST00000296088 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
SNRK-201ENST00000296088 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
SNRK-201ENST00000296088 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
SNRK-201ENST00000296088 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
SNRK-201ENST00000296088 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
SNRK-201ENST00000296088 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SNRK-201ENST00000296088 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
SNRK-201ENST00000296088 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
SNRK-201ENST00000296088 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
SNRK-201ENST00000296088 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
SNRK-201ENST00000296088 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
SNRK-201ENST00000296088 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.12
SNRK-201ENST00000296088 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
SNRK-201ENST00000296088 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SNRK-201ENST00000296088 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
SNRK-201ENST00000296088 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
SNRK-201ENST00000296088 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
SNRK-201ENST00000296088 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
SNRK-201ENST00000296088 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
SNRK-201ENST00000296088 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
SNRK-201ENST00000296088 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
SNRK-201ENST00000296088 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms