RNA–Protein interactions for RNA: ENST00000285238.12

ABCC3-201, Transcript of ATP binding cassette subfamily C member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC3, Length 5,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-201ENST00000285238 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
ABCC3-201ENST00000285238 LCE2DQ5TA82 110 aaPredicted RBP3.89□□□□□ -1.79
ABCC3-201ENST00000285238 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
ABCC3-201ENST00000285238 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
ABCC3-201ENST00000285238 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
ABCC3-201ENST00000285238 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
ABCC3-201ENST00000285238 MT3P25713 68 aa3.83□□□□□ -1.8
ABCC3-201ENST00000285238 HMCN2Q8NDA2 5059 aa3.82□□□□□ -1.8
ABCC3-201ENST00000285238 MUC2Q02817 5179 aa3.81□□□□□ -1.8
ABCC3-201ENST00000285238 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
ABCC3-201ENST00000285238 MT4P47944 62 aa3.8□□□□□ -1.8
ABCC3-201ENST00000285238 KRTAP9-2Q9BYQ4 174 aa3.78□□□□□ -1.8
ABCC3-201ENST00000285238 PRM1P04553 51 aa3.77□□□□□ -1.81
ABCC3-201ENST00000285238 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
ABCC3-201ENST00000285238 MT1AP04731 61 aa3.66□□□□□ -1.82
ABCC3-201ENST00000285238 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
ABCC3-201ENST00000285238 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
ABCC3-201ENST00000285238 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.83
ABCC3-201ENST00000285238 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
ABCC3-201ENST00000285238 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
ABCC3-201ENST00000285238 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
ABCC3-201ENST00000285238 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
ABCC3-201ENST00000285238 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
ABCC3-201ENST00000285238 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
ABCC3-201ENST00000285238 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
ABCC3-201ENST00000285238 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
ABCC3-201ENST00000285238 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
ABCC3-201ENST00000285238 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
ABCC3-201ENST00000285238 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
ABCC3-201ENST00000285238 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
ABCC3-201ENST00000285238 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
ABCC3-201ENST00000285238 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
ABCC3-201ENST00000285238 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
ABCC3-201ENST00000285238 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
ABCC3-201ENST00000285238 KMT2DO14686 5537 aa3.33□□□□□ -1.88
ABCC3-201ENST00000285238 USH2AO75445 5202 aa3.3□□□□□ -1.88
ABCC3-201ENST00000285238 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
ABCC3-201ENST00000285238 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
ABCC3-201ENST00000285238 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
ABCC3-201ENST00000285238 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
ABCC3-201ENST00000285238 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
ABCC3-201ENST00000285238 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
ABCC3-201ENST00000285238 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
ABCC3-201ENST00000285238 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
ABCC3-201ENST00000285238 SSPOA2VEC9 5147 aa3□□□□□ -1.93
ABCC3-201ENST00000285238 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
ABCC3-201ENST00000285238 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
ABCC3-201ENST00000285238 NEBP20929 6669 aa2.88□□□□□ -1.95
ABCC3-201ENST00000285238 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
ABCC3-201ENST00000285238 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
ABCC3-201ENST00000285238 MDN1Q9NU22 5596 aa2.84□□□□□ -1.96
ABCC3-201ENST00000285238 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
ABCC3-201ENST00000285238 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
ABCC3-201ENST00000285238 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
ABCC3-201ENST00000285238 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
ABCC3-201ENST00000285238 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
ABCC3-201ENST00000285238 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
ABCC3-201ENST00000285238 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
ABCC3-201ENST00000285238 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
ABCC3-201ENST00000285238 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
ABCC3-201ENST00000285238 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
ABCC3-201ENST00000285238 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
ABCC3-201ENST00000285238 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
ABCC3-201ENST00000285238 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
ABCC3-201ENST00000285238 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
ABCC3-201ENST00000285238 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
ABCC3-201ENST00000285238 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ABCC3-201ENST00000285238 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
ABCC3-201ENST00000285238 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
ABCC3-201ENST00000285238 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
ABCC3-201ENST00000285238 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
ABCC3-201ENST00000285238 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
ABCC3-201ENST00000285238 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
ABCC3-201ENST00000285238 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
ABCC3-201ENST00000285238 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
ABCC3-201ENST00000285238 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
ABCC3-201ENST00000285238 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms