RNA–Protein interactions for RNA: ENST00000280527.6

CRIM1-201, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIM1, Length 5,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-201ENST00000280527 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
CRIM1-201ENST00000280527 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
CRIM1-201ENST00000280527 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
CRIM1-201ENST00000280527 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
CRIM1-201ENST00000280527 KRTAP9-2Q9BYQ4 174 aa6.62□□□□□ -1.35
CRIM1-201ENST00000280527 EPPK1P58107 5090 aaKnown RBP6.6□□□□□ -1.35
CRIM1-201ENST00000280527 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
CRIM1-201ENST00000280527 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
CRIM1-201ENST00000280527 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
CRIM1-201ENST00000280527 SYNE1Q8NF91 8797 aaKnown RBP6.44□□□□□ -1.38
CRIM1-201ENST00000280527 KRTAP2-3P0C7H8 128 aa6.42□□□□□ -1.38
CRIM1-201ENST00000280527 KRTAP2-4Q9BYR9 128 aa6.42□□□□□ -1.38
CRIM1-201ENST00000280527 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
CRIM1-201ENST00000280527 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
CRIM1-201ENST00000280527 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
CRIM1-201ENST00000280527 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
CRIM1-201ENST00000280527 MT1AP04731 61 aa6.36□□□□□ -1.39
CRIM1-201ENST00000280527 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
CRIM1-201ENST00000280527 HMCN2Q8NDA2 5059 aa6.33□□□□□ -1.4
CRIM1-201ENST00000280527 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
CRIM1-201ENST00000280527 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
CRIM1-201ENST00000280527 RNF213Q63HN8 5207 aa6.24□□□□□ -1.41
CRIM1-201ENST00000280527 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
CRIM1-201ENST00000280527 KRTAP6-2Q3LI66 62 aa6.22□□□□□ -1.41
CRIM1-201ENST00000280527 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.42
CRIM1-201ENST00000280527 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
CRIM1-201ENST00000280527 MUC2Q02817 5179 aa6.07□□□□□ -1.44
CRIM1-201ENST00000280527 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
CRIM1-201ENST00000280527 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
CRIM1-201ENST00000280527 OBSCNQ5VST9 7968 aa5.95□□□□□ -1.46
CRIM1-201ENST00000280527 LCE1CQ5T751 118 aa5.94□□□□□ -1.46
CRIM1-201ENST00000280527 LCE1EQ5T753 118 aa5.94□□□□□ -1.46
CRIM1-201ENST00000280527 LCE1FQ5T754 118 aa5.94□□□□□ -1.46
CRIM1-201ENST00000280527 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
CRIM1-201ENST00000280527 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
CRIM1-201ENST00000280527 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
CRIM1-201ENST00000280527 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
CRIM1-201ENST00000280527 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.51
CRIM1-201ENST00000280527 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
CRIM1-201ENST00000280527 KMT2DO14686 5537 aa5.43□□□□□ -1.54
CRIM1-201ENST00000280527 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
CRIM1-201ENST00000280527 USH2AO75445 5202 aa5.35□□□□□ -1.55
CRIM1-201ENST00000280527 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
CRIM1-201ENST00000280527 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
CRIM1-201ENST00000280527 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
CRIM1-201ENST00000280527 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
CRIM1-201ENST00000280527 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
CRIM1-201ENST00000280527 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
CRIM1-201ENST00000280527 MUC19Q7Z5P9 8384 aa4.87□□□□□ -1.63
CRIM1-201ENST00000280527 NEBP20929 6669 aa4.85□□□□□ -1.63
CRIM1-201ENST00000280527 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
CRIM1-201ENST00000280527 KRTAP4-4Q9BYR3 166 aa4.83□□□□□ -1.64
CRIM1-201ENST00000280527 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
CRIM1-201ENST00000280527 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
CRIM1-201ENST00000280527 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
CRIM1-201ENST00000280527 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
CRIM1-201ENST00000280527 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
CRIM1-201ENST00000280527 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
CRIM1-201ENST00000280527 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
CRIM1-201ENST00000280527 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
CRIM1-201ENST00000280527 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
CRIM1-201ENST00000280527 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
CRIM1-201ENST00000280527 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
CRIM1-201ENST00000280527 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
CRIM1-201ENST00000280527 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
CRIM1-201ENST00000280527 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
CRIM1-201ENST00000280527 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
CRIM1-201ENST00000280527 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
CRIM1-201ENST00000280527 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
CRIM1-201ENST00000280527 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
CRIM1-201ENST00000280527 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
CRIM1-201ENST00000280527 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
CRIM1-201ENST00000280527 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CRIM1-201ENST00000280527 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
CRIM1-201ENST00000280527 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
CRIM1-201ENST00000280527 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CRIM1-201ENST00000280527 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms