RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
SMG9-201ENST00000270066 MT3P25713 68 aa4.14□□□□□ -1.75
SMG9-201ENST00000270066 MT4P47944 62 aa4.1□□□□□ -1.75
SMG9-201ENST00000270066 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
SMG9-201ENST00000270066 PRM1P04553 51 aa4.04□□□□□ -1.76
SMG9-201ENST00000270066 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
SMG9-201ENST00000270066 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
SMG9-201ENST00000270066 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
SMG9-201ENST00000270066 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
SMG9-201ENST00000270066 RNF213Q63HN8 5207 aa3.98□□□□□ -1.77
SMG9-201ENST00000270066 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
SMG9-201ENST00000270066 MT1AP04731 61 aa3.94□□□□□ -1.78
SMG9-201ENST00000270066 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
SMG9-201ENST00000270066 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
SMG9-201ENST00000270066 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
SMG9-201ENST00000270066 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
SMG9-201ENST00000270066 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
SMG9-201ENST00000270066 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
SMG9-201ENST00000270066 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
SMG9-201ENST00000270066 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
SMG9-201ENST00000270066 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.8
SMG9-201ENST00000270066 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.8
SMG9-201ENST00000270066 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.8
SMG9-201ENST00000270066 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
SMG9-201ENST00000270066 MUC2Q02817 5179 aa3.82□□□□□ -1.8
SMG9-201ENST00000270066 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
SMG9-201ENST00000270066 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
SMG9-201ENST00000270066 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
SMG9-201ENST00000270066 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
SMG9-201ENST00000270066 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
SMG9-201ENST00000270066 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
SMG9-201ENST00000270066 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
SMG9-201ENST00000270066 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
SMG9-201ENST00000270066 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
SMG9-201ENST00000270066 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
SMG9-201ENST00000270066 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
SMG9-201ENST00000270066 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
SMG9-201ENST00000270066 USH2AO75445 5202 aa3.3□□□□□ -1.88
SMG9-201ENST00000270066 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SMG9-201ENST00000270066 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SMG9-201ENST00000270066 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SMG9-201ENST00000270066 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
SMG9-201ENST00000270066 KMT2DO14686 5537 aa3.26□□□□□ -1.89
SMG9-201ENST00000270066 DSTQ03001 7570 aaKnown RBP3.25□□□□□ -1.89
SMG9-201ENST00000270066 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
SMG9-201ENST00000270066 NEBP20929 6669 aa3.13□□□□□ -1.91
SMG9-201ENST00000270066 MACF1Q9UPN3 7388 aaKnown RBP3.13□□□□□ -1.91
SMG9-201ENST00000270066 SSPOA2VEC9 5147 aa3.11□□□□□ -1.91
SMG9-201ENST00000270066 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
SMG9-201ENST00000270066 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
SMG9-201ENST00000270066 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
SMG9-201ENST00000270066 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
SMG9-201ENST00000270066 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.93
SMG9-201ENST00000270066 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
SMG9-201ENST00000270066 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
SMG9-201ENST00000270066 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
SMG9-201ENST00000270066 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
SMG9-201ENST00000270066 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.98
SMG9-201ENST00000270066 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
SMG9-201ENST00000270066 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
SMG9-201ENST00000270066 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
SMG9-201ENST00000270066 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
SMG9-201ENST00000270066 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
SMG9-201ENST00000270066 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
SMG9-201ENST00000270066 KRTAP5-8O75690 187 aa2.28□□□□□ -2.05
SMG9-201ENST00000270066 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
SMG9-201ENST00000270066 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
SMG9-201ENST00000270066 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
SMG9-201ENST00000270066 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
SMG9-201ENST00000270066 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
SMG9-201ENST00000270066 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
SMG9-201ENST00000270066 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
SMG9-201ENST00000270066 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
SMG9-201ENST00000270066 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
SMG9-201ENST00000270066 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
SMG9-201ENST00000270066 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SMG9-201ENST00000270066 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 145.6 ms