RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
CDH11-201ENST00000268603 MT1LQ93083 61 aa3.89□□□□□ -1.79
CDH11-201ENST00000268603 MUC2Q02817 5179 aa3.86□□□□□ -1.79
CDH11-201ENST00000268603 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
CDH11-201ENST00000268603 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
CDH11-201ENST00000268603 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
CDH11-201ENST00000268603 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
CDH11-201ENST00000268603 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
CDH11-201ENST00000268603 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
CDH11-201ENST00000268603 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
CDH11-201ENST00000268603 MT1EP04732 61 aa3.82□□□□□ -1.8
CDH11-201ENST00000268603 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
CDH11-201ENST00000268603 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
CDH11-201ENST00000268603 MT1MQ8N339 61 aa3.79□□□□□ -1.8
CDH11-201ENST00000268603 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
CDH11-201ENST00000268603 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
CDH11-201ENST00000268603 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
CDH11-201ENST00000268603 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
CDH11-201ENST00000268603 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
CDH11-201ENST00000268603 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
CDH11-201ENST00000268603 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
CDH11-201ENST00000268603 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
CDH11-201ENST00000268603 KRTAP9-7A8MTY7 169 aa3.53□□□□□ -1.84
CDH11-201ENST00000268603 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
CDH11-201ENST00000268603 MT1AP04731 61 aa3.53□□□□□ -1.84
CDH11-201ENST00000268603 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
CDH11-201ENST00000268603 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
CDH11-201ENST00000268603 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
CDH11-201ENST00000268603 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
CDH11-201ENST00000268603 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
CDH11-201ENST00000268603 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
CDH11-201ENST00000268603 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
CDH11-201ENST00000268603 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
CDH11-201ENST00000268603 KMT2DO14686 5537 aa3.4□□□□□ -1.87
CDH11-201ENST00000268603 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
CDH11-201ENST00000268603 USH2AO75445 5202 aa3.34□□□□□ -1.87
CDH11-201ENST00000268603 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
CDH11-201ENST00000268603 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
CDH11-201ENST00000268603 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
CDH11-201ENST00000268603 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
CDH11-201ENST00000268603 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
CDH11-201ENST00000268603 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
CDH11-201ENST00000268603 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
CDH11-201ENST00000268603 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
CDH11-201ENST00000268603 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
CDH11-201ENST00000268603 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
CDH11-201ENST00000268603 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
CDH11-201ENST00000268603 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
CDH11-201ENST00000268603 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
CDH11-201ENST00000268603 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
CDH11-201ENST00000268603 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
CDH11-201ENST00000268603 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.96
CDH11-201ENST00000268603 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.96
CDH11-201ENST00000268603 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
CDH11-201ENST00000268603 MDN1Q9NU22 5596 aa2.57□□□□□ -2
CDH11-201ENST00000268603 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
CDH11-201ENST00000268603 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
CDH11-201ENST00000268603 NEBP20929 6669 aa2.5□□□□□ -2.01
CDH11-201ENST00000268603 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
CDH11-201ENST00000268603 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
CDH11-201ENST00000268603 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
CDH11-201ENST00000268603 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
CDH11-201ENST00000268603 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.08
CDH11-201ENST00000268603 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
CDH11-201ENST00000268603 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
CDH11-201ENST00000268603 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
CDH11-201ENST00000268603 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
CDH11-201ENST00000268603 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CDH11-201ENST00000268603 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
CDH11-201ENST00000268603 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CDH11-201ENST00000268603 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
CDH11-201ENST00000268603 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
CDH11-201ENST00000268603 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
CDH11-201ENST00000268603 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
CDH11-201ENST00000268603 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
CDH11-201ENST00000268603 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
CDH11-201ENST00000268603 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 84.6 ms