RNA–Protein interactions for RNA: ENST00000266674.9

LGR5-201, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR5, Length 4,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-201ENST00000266674 SPRR2DP22532 72 aa4.29□□□□□ -1.72
LGR5-201ENST00000266674 MUC2Q02817 5179 aa4.29□□□□□ -1.72
LGR5-201ENST00000266674 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
LGR5-201ENST00000266674 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
LGR5-201ENST00000266674 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
LGR5-201ENST00000266674 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
LGR5-201ENST00000266674 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
LGR5-201ENST00000266674 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
LGR5-201ENST00000266674 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
LGR5-201ENST00000266674 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
LGR5-201ENST00000266674 PRM1P04553 51 aa4.21□□□□□ -1.74
LGR5-201ENST00000266674 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
LGR5-201ENST00000266674 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.74
LGR5-201ENST00000266674 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
LGR5-201ENST00000266674 MT3P25713 68 aa4.1□□□□□ -1.75
LGR5-201ENST00000266674 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
LGR5-201ENST00000266674 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
LGR5-201ENST00000266674 MT1AP04731 61 aa4□□□□□ -1.77
LGR5-201ENST00000266674 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
LGR5-201ENST00000266674 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.78
LGR5-201ENST00000266674 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
LGR5-201ENST00000266674 MT4P47944 62 aa3.83□□□□□ -1.8
LGR5-201ENST00000266674 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
LGR5-201ENST00000266674 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
LGR5-201ENST00000266674 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
LGR5-201ENST00000266674 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
LGR5-201ENST00000266674 USH2AO75445 5202 aa3.78□□□□□ -1.8
LGR5-201ENST00000266674 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
LGR5-201ENST00000266674 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
LGR5-201ENST00000266674 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
LGR5-201ENST00000266674 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
LGR5-201ENST00000266674 KMT2DO14686 5537 aa3.69□□□□□ -1.82
LGR5-201ENST00000266674 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
LGR5-201ENST00000266674 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
LGR5-201ENST00000266674 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
LGR5-201ENST00000266674 MUC12Q9UKN1 5478 aa3.44□□□□□ -1.86
LGR5-201ENST00000266674 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
LGR5-201ENST00000266674 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
LGR5-201ENST00000266674 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
LGR5-201ENST00000266674 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
LGR5-201ENST00000266674 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
LGR5-201ENST00000266674 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
LGR5-201ENST00000266674 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
LGR5-201ENST00000266674 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
LGR5-201ENST00000266674 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
LGR5-201ENST00000266674 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
LGR5-201ENST00000266674 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
LGR5-201ENST00000266674 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
LGR5-201ENST00000266674 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
LGR5-201ENST00000266674 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
LGR5-201ENST00000266674 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
LGR5-201ENST00000266674 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
LGR5-201ENST00000266674 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
LGR5-201ENST00000266674 NEBP20929 6669 aa2.94□□□□□ -1.94
LGR5-201ENST00000266674 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
LGR5-201ENST00000266674 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
LGR5-201ENST00000266674 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
LGR5-201ENST00000266674 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
LGR5-201ENST00000266674 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
LGR5-201ENST00000266674 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
LGR5-201ENST00000266674 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -2
LGR5-201ENST00000266674 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -2
LGR5-201ENST00000266674 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
LGR5-201ENST00000266674 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
LGR5-201ENST00000266674 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
LGR5-201ENST00000266674 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
LGR5-201ENST00000266674 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
LGR5-201ENST00000266674 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
LGR5-201ENST00000266674 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
LGR5-201ENST00000266674 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
LGR5-201ENST00000266674 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
LGR5-201ENST00000266674 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
LGR5-201ENST00000266674 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
LGR5-201ENST00000266674 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
LGR5-201ENST00000266674 PHGR1C9JFL3 82 aa1.71□□□□□ -2.13
LGR5-201ENST00000266674 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
LGR5-201ENST00000266674 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 75.7 ms