RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 MT1MQ8N339 61 aa2.67□□□□□ -1.98
COL6A5-201ENST00000265379 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
COL6A5-201ENST00000265379 KRTAP19-7Q3SYF9 63 aa2.63□□□□□ -1.99
COL6A5-201ENST00000265379 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
COL6A5-201ENST00000265379 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
COL6A5-201ENST00000265379 KRTAP4-8A0A0G2JLE6 195 aa2.6□□□□□ -1.99
COL6A5-201ENST00000265379 KRTAP4-8Q9BYQ9 185 aa2.6□□□□□ -1.99
COL6A5-201ENST00000265379 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
COL6A5-201ENST00000265379 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
COL6A5-201ENST00000265379 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
COL6A5-201ENST00000265379 PRM1P04553 51 aa2.57□□□□□ -2
COL6A5-201ENST00000265379 MT1AP04731 61 aa2.56□□□□□ -2
COL6A5-201ENST00000265379 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
COL6A5-201ENST00000265379 LPAP08519 4548 aa2.55□□□□□ -2
COL6A5-201ENST00000265379 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
COL6A5-201ENST00000265379 KRTAP9-2Q9BYQ4 174 aa2.54□□□□□ -2
COL6A5-201ENST00000265379 LCE1DQ5T752 114 aa2.53□□□□□ -2.01
COL6A5-201ENST00000265379 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
COL6A5-201ENST00000265379 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
COL6A5-201ENST00000265379 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
COL6A5-201ENST00000265379 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
COL6A5-201ENST00000265379 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
COL6A5-201ENST00000265379 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
COL6A5-201ENST00000265379 LOC100996750A0A140TA64 210 aa2.45□□□□□ -2.02
COL6A5-201ENST00000265379 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
COL6A5-201ENST00000265379 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
COL6A5-201ENST00000265379 KRTAP9-6A0A140TA67 174 aa2.42□□□□□ -2.02
COL6A5-201ENST00000265379 USH2AO75445 5202 aa2.41□□□□□ -2.02
COL6A5-201ENST00000265379 SYNE2Q8WXH0 6885 aaKnown RBP2.32□□□□□ -2.04
COL6A5-201ENST00000265379 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
COL6A5-201ENST00000265379 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.29□□□□□ -2.04
COL6A5-201ENST00000265379 KRTAP9-4Q9BYQ2 154 aa2.29□□□□□ -2.04
COL6A5-201ENST00000265379 KRTAP20-1Q3LI63 56 aa2.26□□□□□ -2.05
COL6A5-201ENST00000265379 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
COL6A5-201ENST00000265379 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
COL6A5-201ENST00000265379 KRTAP9-7A8MTY7 169 aa2.24□□□□□ -2.05
COL6A5-201ENST00000265379 FSIP2Q5CZC0 6907 aa2.22□□□□□ -2.05
COL6A5-201ENST00000265379 MUC2Q02817 5179 aa2.2□□□□□ -2.06
COL6A5-201ENST00000265379 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
COL6A5-201ENST00000265379 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
COL6A5-201ENST00000265379 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
COL6A5-201ENST00000265379 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
COL6A5-201ENST00000265379 NEBP20929 6669 aa2.13□□□□□ -2.07
COL6A5-201ENST00000265379 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
COL6A5-201ENST00000265379 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
COL6A5-201ENST00000265379 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
COL6A5-201ENST00000265379 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
COL6A5-201ENST00000265379 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
COL6A5-201ENST00000265379 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
COL6A5-201ENST00000265379 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
COL6A5-201ENST00000265379 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
COL6A5-201ENST00000265379 KMT2DO14686 5537 aa1.99□□□□□ -2.09
COL6A5-201ENST00000265379 SYNE1Q8NF91 8797 aaKnown RBP1.99□□□□□ -2.09
COL6A5-201ENST00000265379 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
COL6A5-201ENST00000265379 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
COL6A5-201ENST00000265379 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
COL6A5-201ENST00000265379 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
COL6A5-201ENST00000265379 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
COL6A5-201ENST00000265379 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
COL6A5-201ENST00000265379 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
COL6A5-201ENST00000265379 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
COL6A5-201ENST00000265379 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
COL6A5-201ENST00000265379 KRTAP5-3Q6L8H2 238 aa1.78□□□□□ -2.12
COL6A5-201ENST00000265379 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
COL6A5-201ENST00000265379 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
COL6A5-201ENST00000265379 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
COL6A5-201ENST00000265379 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
COL6A5-201ENST00000265379 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
COL6A5-201ENST00000265379 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
COL6A5-201ENST00000265379 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
COL6A5-201ENST00000265379 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
COL6A5-201ENST00000265379 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
COL6A5-201ENST00000265379 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
COL6A5-201ENST00000265379 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
COL6A5-201ENST00000265379 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
COL6A5-201ENST00000265379 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
COL6A5-201ENST00000265379 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 50.8 ms