RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 PRM1P04553 51 aa6.01□□□□□ -1.45
FAM20B-201ENST00000263733 MT1MQ8N339 61 aa6.01□□□□□ -1.45
FAM20B-201ENST00000263733 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.46
FAM20B-201ENST00000263733 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
FAM20B-201ENST00000263733 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
FAM20B-201ENST00000263733 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
FAM20B-201ENST00000263733 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
FAM20B-201ENST00000263733 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
FAM20B-201ENST00000263733 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
FAM20B-201ENST00000263733 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
FAM20B-201ENST00000263733 MT3P25713 68 aa5.75□□□□□ -1.49
FAM20B-201ENST00000263733 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
FAM20B-201ENST00000263733 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
FAM20B-201ENST00000263733 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
FAM20B-201ENST00000263733 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
FAM20B-201ENST00000263733 MUC2Q02817 5179 aa5.67□□□□□ -1.5
FAM20B-201ENST00000263733 MT4P47944 62 aa5.64□□□□□ -1.51
FAM20B-201ENST00000263733 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
FAM20B-201ENST00000263733 MT1AP04731 61 aa5.55□□□□□ -1.52
FAM20B-201ENST00000263733 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
FAM20B-201ENST00000263733 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
FAM20B-201ENST00000263733 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
FAM20B-201ENST00000263733 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
FAM20B-201ENST00000263733 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
FAM20B-201ENST00000263733 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
FAM20B-201ENST00000263733 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
FAM20B-201ENST00000263733 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
FAM20B-201ENST00000263733 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
FAM20B-201ENST00000263733 KMT2DO14686 5537 aa5.19□□□□□ -1.58
FAM20B-201ENST00000263733 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
FAM20B-201ENST00000263733 USH2AO75445 5202 aa5.16□□□□□ -1.58
FAM20B-201ENST00000263733 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
FAM20B-201ENST00000263733 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
FAM20B-201ENST00000263733 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
FAM20B-201ENST00000263733 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
FAM20B-201ENST00000263733 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
FAM20B-201ENST00000263733 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
FAM20B-201ENST00000263733 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
FAM20B-201ENST00000263733 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
FAM20B-201ENST00000263733 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
FAM20B-201ENST00000263733 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
FAM20B-201ENST00000263733 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
FAM20B-201ENST00000263733 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
FAM20B-201ENST00000263733 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
FAM20B-201ENST00000263733 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
FAM20B-201ENST00000263733 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
FAM20B-201ENST00000263733 MUC19Q7Z5P9 8384 aa4.5□□□□□ -1.69
FAM20B-201ENST00000263733 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
FAM20B-201ENST00000263733 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
FAM20B-201ENST00000263733 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
FAM20B-201ENST00000263733 KRTAP5-9P26371 169 aa4.21□□□□□ -1.73
FAM20B-201ENST00000263733 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
FAM20B-201ENST00000263733 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
FAM20B-201ENST00000263733 NEBP20929 6669 aa4.1□□□□□ -1.75
FAM20B-201ENST00000263733 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
FAM20B-201ENST00000263733 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
FAM20B-201ENST00000263733 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
FAM20B-201ENST00000263733 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
FAM20B-201ENST00000263733 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
FAM20B-201ENST00000263733 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
FAM20B-201ENST00000263733 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
FAM20B-201ENST00000263733 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
FAM20B-201ENST00000263733 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
FAM20B-201ENST00000263733 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
FAM20B-201ENST00000263733 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
FAM20B-201ENST00000263733 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
FAM20B-201ENST00000263733 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
FAM20B-201ENST00000263733 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
FAM20B-201ENST00000263733 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
FAM20B-201ENST00000263733 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
FAM20B-201ENST00000263733 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
FAM20B-201ENST00000263733 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
FAM20B-201ENST00000263733 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
FAM20B-201ENST00000263733 PHGR1C9JFL3 82 aa2.56□□□□□ -2
FAM20B-201ENST00000263733 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
FAM20B-201ENST00000263733 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
FAM20B-201ENST00000263733 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 67 ms