RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
TBC1D1-201ENST00000261439 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
TBC1D1-201ENST00000261439 MT3P25713 68 aa4.4□□□□□ -1.71
TBC1D1-201ENST00000261439 MT4P47944 62 aa4.34□□□□□ -1.71
TBC1D1-201ENST00000261439 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
TBC1D1-201ENST00000261439 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
TBC1D1-201ENST00000261439 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
TBC1D1-201ENST00000261439 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
TBC1D1-201ENST00000261439 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
TBC1D1-201ENST00000261439 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.73
TBC1D1-201ENST00000261439 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.73
TBC1D1-201ENST00000261439 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.73
TBC1D1-201ENST00000261439 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
TBC1D1-201ENST00000261439 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
TBC1D1-201ENST00000261439 HMCN2Q8NDA2 5059 aa4.18□□□□□ -1.74
TBC1D1-201ENST00000261439 MT1AP04731 61 aa4.16□□□□□ -1.74
TBC1D1-201ENST00000261439 RNF213Q63HN8 5207 aa4.11□□□□□ -1.75
TBC1D1-201ENST00000261439 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
TBC1D1-201ENST00000261439 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
TBC1D1-201ENST00000261439 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
TBC1D1-201ENST00000261439 MUC2Q02817 5179 aa4.05□□□□□ -1.76
TBC1D1-201ENST00000261439 KRTAP9-2Q9BYQ4 174 aa4.02□□□□□ -1.77
TBC1D1-201ENST00000261439 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
TBC1D1-201ENST00000261439 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
TBC1D1-201ENST00000261439 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
TBC1D1-201ENST00000261439 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
TBC1D1-201ENST00000261439 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
TBC1D1-201ENST00000261439 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
TBC1D1-201ENST00000261439 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
TBC1D1-201ENST00000261439 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
TBC1D1-201ENST00000261439 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
TBC1D1-201ENST00000261439 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
TBC1D1-201ENST00000261439 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
TBC1D1-201ENST00000261439 USH2AO75445 5202 aa3.64□□□□□ -1.83
TBC1D1-201ENST00000261439 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
TBC1D1-201ENST00000261439 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
TBC1D1-201ENST00000261439 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
TBC1D1-201ENST00000261439 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
TBC1D1-201ENST00000261439 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
TBC1D1-201ENST00000261439 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
TBC1D1-201ENST00000261439 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
TBC1D1-201ENST00000261439 KMT2DO14686 5537 aa3.52□□□□□ -1.85
TBC1D1-201ENST00000261439 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
TBC1D1-201ENST00000261439 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
TBC1D1-201ENST00000261439 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
TBC1D1-201ENST00000261439 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
TBC1D1-201ENST00000261439 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
TBC1D1-201ENST00000261439 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
TBC1D1-201ENST00000261439 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
TBC1D1-201ENST00000261439 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
TBC1D1-201ENST00000261439 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
TBC1D1-201ENST00000261439 NEBP20929 6669 aa3.08□□□□□ -1.92
TBC1D1-201ENST00000261439 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
TBC1D1-201ENST00000261439 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
TBC1D1-201ENST00000261439 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
TBC1D1-201ENST00000261439 MDN1Q9NU22 5596 aa3□□□□□ -1.93
TBC1D1-201ENST00000261439 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
TBC1D1-201ENST00000261439 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
TBC1D1-201ENST00000261439 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
TBC1D1-201ENST00000261439 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
TBC1D1-201ENST00000261439 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
TBC1D1-201ENST00000261439 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
TBC1D1-201ENST00000261439 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
TBC1D1-201ENST00000261439 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
TBC1D1-201ENST00000261439 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
TBC1D1-201ENST00000261439 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
TBC1D1-201ENST00000261439 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
TBC1D1-201ENST00000261439 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
TBC1D1-201ENST00000261439 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
TBC1D1-201ENST00000261439 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
TBC1D1-201ENST00000261439 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
TBC1D1-201ENST00000261439 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
TBC1D1-201ENST00000261439 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
TBC1D1-201ENST00000261439 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
TBC1D1-201ENST00000261439 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
TBC1D1-201ENST00000261439 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
TBC1D1-201ENST00000261439 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms