RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 MT1MQ8N339 61 aa4.38□□□□□ -1.71
TMCC3-201ENST00000261226 HMCN2Q8NDA2 5059 aa4.37□□□□□ -1.71
TMCC3-201ENST00000261226 PRM1P04553 51 aa4.35□□□□□ -1.71
TMCC3-201ENST00000261226 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
TMCC3-201ENST00000261226 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
TMCC3-201ENST00000261226 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
TMCC3-201ENST00000261226 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
TMCC3-201ENST00000261226 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
TMCC3-201ENST00000261226 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
TMCC3-201ENST00000261226 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
TMCC3-201ENST00000261226 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
TMCC3-201ENST00000261226 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
TMCC3-201ENST00000261226 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
TMCC3-201ENST00000261226 MUC2Q02817 5179 aa4.18□□□□□ -1.74
TMCC3-201ENST00000261226 MT3P25713 68 aa4.17□□□□□ -1.74
TMCC3-201ENST00000261226 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
TMCC3-201ENST00000261226 MT1AP04731 61 aa4.05□□□□□ -1.76
TMCC3-201ENST00000261226 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
TMCC3-201ENST00000261226 MT4P47944 62 aa4□□□□□ -1.77
TMCC3-201ENST00000261226 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
TMCC3-201ENST00000261226 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
TMCC3-201ENST00000261226 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
TMCC3-201ENST00000261226 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
TMCC3-201ENST00000261226 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
TMCC3-201ENST00000261226 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
TMCC3-201ENST00000261226 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
TMCC3-201ENST00000261226 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
TMCC3-201ENST00000261226 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
TMCC3-201ENST00000261226 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
TMCC3-201ENST00000261226 KMT2DO14686 5537 aa3.79□□□□□ -1.8
TMCC3-201ENST00000261226 USH2AO75445 5202 aa3.78□□□□□ -1.81
TMCC3-201ENST00000261226 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
TMCC3-201ENST00000261226 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
TMCC3-201ENST00000261226 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
TMCC3-201ENST00000261226 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
TMCC3-201ENST00000261226 MUC12Q9UKN1 5478 aa3.44□□□□□ -1.86
TMCC3-201ENST00000261226 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
TMCC3-201ENST00000261226 SSPOA2VEC9 5147 aa3.43□□□□□ -1.86
TMCC3-201ENST00000261226 KRTAP9-6A0A140TA67 174 aa3.41□□□□□ -1.86
TMCC3-201ENST00000261226 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
TMCC3-201ENST00000261226 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
TMCC3-201ENST00000261226 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
TMCC3-201ENST00000261226 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
TMCC3-201ENST00000261226 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
TMCC3-201ENST00000261226 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
TMCC3-201ENST00000261226 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
TMCC3-201ENST00000261226 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
TMCC3-201ENST00000261226 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TMCC3-201ENST00000261226 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
TMCC3-201ENST00000261226 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
TMCC3-201ENST00000261226 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
TMCC3-201ENST00000261226 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
TMCC3-201ENST00000261226 NEBP20929 6669 aa3.01□□□□□ -1.93
TMCC3-201ENST00000261226 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
TMCC3-201ENST00000261226 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TMCC3-201ENST00000261226 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.96
TMCC3-201ENST00000261226 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
TMCC3-201ENST00000261226 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
TMCC3-201ENST00000261226 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
TMCC3-201ENST00000261226 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
TMCC3-201ENST00000261226 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
TMCC3-201ENST00000261226 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
TMCC3-201ENST00000261226 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
TMCC3-201ENST00000261226 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
TMCC3-201ENST00000261226 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
TMCC3-201ENST00000261226 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
TMCC3-201ENST00000261226 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
TMCC3-201ENST00000261226 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
TMCC3-201ENST00000261226 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
TMCC3-201ENST00000261226 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
TMCC3-201ENST00000261226 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
TMCC3-201ENST00000261226 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
TMCC3-201ENST00000261226 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
TMCC3-201ENST00000261226 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
TMCC3-201ENST00000261226 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
TMCC3-201ENST00000261226 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
TMCC3-201ENST00000261226 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 85.8 ms