RNA–Protein interactions for RNA: ENST00000260665.11

LRPPRC-201, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPPRC, Length 6,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-201ENST00000260665 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
LRPPRC-201ENST00000260665 EPPK1P58107 5090 aaKnown RBP3.51□□□□□ -1.85
LRPPRC-201ENST00000260665 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
LRPPRC-201ENST00000260665 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
LRPPRC-201ENST00000260665 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
LRPPRC-201ENST00000260665 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
LRPPRC-201ENST00000260665 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
LRPPRC-201ENST00000260665 MT1AP04731 61 aa3.45□□□□□ -1.86
LRPPRC-201ENST00000260665 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
LRPPRC-201ENST00000260665 TNXBP22105 4242 aa3.41□□□□□ -1.86
LRPPRC-201ENST00000260665 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
LRPPRC-201ENST00000260665 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
LRPPRC-201ENST00000260665 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
LRPPRC-201ENST00000260665 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
LRPPRC-201ENST00000260665 LPAP08519 4548 aa3.36□□□□□ -1.87
LRPPRC-201ENST00000260665 KRTAP19-6Q3LI70 58 aa3.33□□□□□ -1.88
LRPPRC-201ENST00000260665 BIRC6Q9NR09 4857 aa3.32□□□□□ -1.88
LRPPRC-201ENST00000260665 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
LRPPRC-201ENST00000260665 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
LRPPRC-201ENST00000260665 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
LRPPRC-201ENST00000260665 RNF213Q63HN8 5207 aa3.24□□□□□ -1.89
LRPPRC-201ENST00000260665 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
LRPPRC-201ENST00000260665 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
LRPPRC-201ENST00000260665 FAT4Q6V0I7 4981 aa3.22□□□□□ -1.89
LRPPRC-201ENST00000260665 FSIP2Q5CZC0 6907 aa3.17□□□□□ -1.9
LRPPRC-201ENST00000260665 MUC2Q02817 5179 aa3.17□□□□□ -1.9
LRPPRC-201ENST00000260665 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
LRPPRC-201ENST00000260665 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
LRPPRC-201ENST00000260665 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
LRPPRC-201ENST00000260665 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
LRPPRC-201ENST00000260665 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
LRPPRC-201ENST00000260665 KRTAP9-2Q9BYQ4 174 aa3.12□□□□□ -1.91
LRPPRC-201ENST00000260665 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
LRPPRC-201ENST00000260665 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
LRPPRC-201ENST00000260665 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
LRPPRC-201ENST00000260665 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
LRPPRC-201ENST00000260665 USH2AO75445 5202 aa2.98□□□□□ -1.93
LRPPRC-201ENST00000260665 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
LRPPRC-201ENST00000260665 LCE2AQ5TA79 106 aaPredicted RBP2.92□□□□□ -1.94
LRPPRC-201ENST00000260665 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
LRPPRC-201ENST00000260665 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
LRPPRC-201ENST00000260665 KRTAP9-6A0A140TA67 174 aa2.83□□□□□ -1.96
LRPPRC-201ENST00000260665 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
LRPPRC-201ENST00000260665 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
LRPPRC-201ENST00000260665 KMT2DO14686 5537 aa2.77□□□□□ -1.97
LRPPRC-201ENST00000260665 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
LRPPRC-201ENST00000260665 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
LRPPRC-201ENST00000260665 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
LRPPRC-201ENST00000260665 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
LRPPRC-201ENST00000260665 SSPOA2VEC9 5147 aa2.58□□□□□ -2
LRPPRC-201ENST00000260665 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
LRPPRC-201ENST00000260665 MDN1Q9NU22 5596 aa2.54□□□□□ -2
LRPPRC-201ENST00000260665 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
LRPPRC-201ENST00000260665 NEBP20929 6669 aa2.45□□□□□ -2.02
LRPPRC-201ENST00000260665 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
LRPPRC-201ENST00000260665 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
LRPPRC-201ENST00000260665 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
LRPPRC-201ENST00000260665 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
LRPPRC-201ENST00000260665 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
LRPPRC-201ENST00000260665 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
LRPPRC-201ENST00000260665 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
LRPPRC-201ENST00000260665 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
LRPPRC-201ENST00000260665 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
LRPPRC-201ENST00000260665 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.1
LRPPRC-201ENST00000260665 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
LRPPRC-201ENST00000260665 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
LRPPRC-201ENST00000260665 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
LRPPRC-201ENST00000260665 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
LRPPRC-201ENST00000260665 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
LRPPRC-201ENST00000260665 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
LRPPRC-201ENST00000260665 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
LRPPRC-201ENST00000260665 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
LRPPRC-201ENST00000260665 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
LRPPRC-201ENST00000260665 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
LRPPRC-201ENST00000260665 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
LRPPRC-201ENST00000260665 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
LRPPRC-201ENST00000260665 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 15.4 ms