RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 MT4P47944 62 aa2.14□□□□□ -2.07
CPS1-201ENST00000233072 FLGP20930 4061 aaPredicted RBP2.13□□□□□ -2.07
CPS1-201ENST00000233072 ABCA13Q86UQ4 5058 aa2.12□□□□□ -2.07
CPS1-201ENST00000233072 KRTAP9-2Q9BYQ4 174 aa2.12□□□□□ -2.07
CPS1-201ENST00000233072 KIAA1109Q2LD37 5005 aa2.12□□□□□ -2.07
CPS1-201ENST00000233072 LCE2AQ5TA79 106 aaPredicted RBP2.11□□□□□ -2.07
CPS1-201ENST00000233072 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
CPS1-201ENST00000233072 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
CPS1-201ENST00000233072 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
CPS1-201ENST00000233072 LCE1AQ5T7P2 110 aa2.08□□□□□ -2.08
CPS1-201ENST00000233072 LCE1DQ5T752 114 aa2.07□□□□□ -2.08
CPS1-201ENST00000233072 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
CPS1-201ENST00000233072 KRTAP20-1Q3LI63 56 aa2.06□□□□□ -2.08
CPS1-201ENST00000233072 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
CPS1-201ENST00000233072 KRTAP9-6A0A140TA67 174 aa2.06□□□□□ -2.08
CPS1-201ENST00000233072 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
CPS1-201ENST00000233072 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.04□□□□□ -2.08
CPS1-201ENST00000233072 LCE4AQ5TA78 99 aa2.04□□□□□ -2.08
CPS1-201ENST00000233072 KRTAP4-3Q9BYR4 195 aa2.03□□□□□ -2.08
CPS1-201ENST00000233072 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
CPS1-201ENST00000233072 KRTAP9-4Q9BYQ2 154 aa2□□□□□ -2.09
CPS1-201ENST00000233072 LPAP08519 4548 aa1.99□□□□□ -2.09
CPS1-201ENST00000233072 LCE5AQ5TCM9 118 aa1.98□□□□□ -2.09
CPS1-201ENST00000233072 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
CPS1-201ENST00000233072 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
CPS1-201ENST00000233072 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CPS1-201ENST00000233072 KRTAP9-7A8MTY7 169 aa1.91□□□□□ -2.1
CPS1-201ENST00000233072 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
CPS1-201ENST00000233072 KRTAP2-2Q9BYT5 123 aa1.9□□□□□ -2.11
CPS1-201ENST00000233072 KRTAP4-9Q9BYQ8 210 aa1.88□□□□□ -2.11
CPS1-201ENST00000233072 KRTAP4-12Q9BQ66 201 aa1.85□□□□□ -2.11
CPS1-201ENST00000233072 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
CPS1-201ENST00000233072 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
CPS1-201ENST00000233072 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
CPS1-201ENST00000233072 KRTAP9-6A8MVA2 160 aa1.8□□□□□ -2.12
CPS1-201ENST00000233072 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
CPS1-201ENST00000233072 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
CPS1-201ENST00000233072 LCE1EQ5T753 118 aa1.8□□□□□ -2.12
CPS1-201ENST00000233072 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
CPS1-201ENST00000233072 MUC2Q02817 5179 aa1.72□□□□□ -2.13
CPS1-201ENST00000233072 SYNE2Q8WXH0 6885 aaKnown RBP1.7□□□□□ -2.14
CPS1-201ENST00000233072 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
CPS1-201ENST00000233072 KRTAP4-11Q9BYQ6 195 aa1.67□□□□□ -2.14
CPS1-201ENST00000233072 FSIP2Q5CZC0 6907 aa1.64□□□□□ -2.15
CPS1-201ENST00000233072 SSPOA2VEC9 5147 aa1.61□□□□□ -2.15
CPS1-201ENST00000233072 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
CPS1-201ENST00000233072 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
CPS1-201ENST00000233072 NEBP20929 6669 aa1.57□□□□□ -2.16
CPS1-201ENST00000233072 USH2AO75445 5202 aa1.55□□□□□ -2.16
CPS1-201ENST00000233072 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
CPS1-201ENST00000233072 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
CPS1-201ENST00000233072 KRTAP5-5Q701N2 237 aaPredicted RBP1.41□□□□□ -2.18
CPS1-201ENST00000233072 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.19
CPS1-201ENST00000233072 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
CPS1-201ENST00000233072 KMT2DO14686 5537 aa1.36□□□□□ -2.19
CPS1-201ENST00000233072 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
CPS1-201ENST00000233072 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
CPS1-201ENST00000233072 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
CPS1-201ENST00000233072 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
CPS1-201ENST00000233072 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
CPS1-201ENST00000233072 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
CPS1-201ENST00000233072 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
CPS1-201ENST00000233072 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
CPS1-201ENST00000233072 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
CPS1-201ENST00000233072 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
CPS1-201ENST00000233072 GPR98Q8WXG9 6306 aa1.14□□□□□ -2.23
CPS1-201ENST00000233072 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
CPS1-201ENST00000233072 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
CPS1-201ENST00000233072 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
CPS1-201ENST00000233072 KRTAP5-1Q6L8H4 278 aa1.09□□□□□ -2.24
CPS1-201ENST00000233072 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
CPS1-201ENST00000233072 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
CPS1-201ENST00000233072 AHNAKQ09666 5890 aaKnown RBP1.03□□□□□ -2.25
CPS1-201ENST00000233072 KRTAP5-7Q6L8G8 165 aa1.03□□□□□ -2.25
CPS1-201ENST00000233072 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
CPS1-201ENST00000233072 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CPS1-201ENST00000233072 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 157.7 ms