RNA–Protein interactions for RNA: ENST00000232607.6

UMPS-201, Transcript of uridine monophosphate synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UMPS, Length 6,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UMPS-201ENST00000232607 MUC17Q685J3 4493 aa3.85□□□□□ -1.79
UMPS-201ENST00000232607 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
UMPS-201ENST00000232607 MT1MQ8N339 61 aa3.84□□□□□ -1.79
UMPS-201ENST00000232607 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
UMPS-201ENST00000232607 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
UMPS-201ENST00000232607 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
UMPS-201ENST00000232607 PRM1P04553 51 aa3.78□□□□□ -1.8
UMPS-201ENST00000232607 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
UMPS-201ENST00000232607 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
UMPS-201ENST00000232607 MT3P25713 68 aa3.7□□□□□ -1.82
UMPS-201ENST00000232607 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
UMPS-201ENST00000232607 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
UMPS-201ENST00000232607 FAT4Q6V0I7 4981 aa3.67□□□□□ -1.82
UMPS-201ENST00000232607 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
UMPS-201ENST00000232607 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
UMPS-201ENST00000232607 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
UMPS-201ENST00000232607 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
UMPS-201ENST00000232607 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
UMPS-201ENST00000232607 MUC2Q02817 5179 aa3.55□□□□□ -1.84
UMPS-201ENST00000232607 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
UMPS-201ENST00000232607 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
UMPS-201ENST00000232607 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
UMPS-201ENST00000232607 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
UMPS-201ENST00000232607 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
UMPS-201ENST00000232607 MT1AP04731 61 aa3.46□□□□□ -1.86
UMPS-201ENST00000232607 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
UMPS-201ENST00000232607 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
UMPS-201ENST00000232607 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
UMPS-201ENST00000232607 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
UMPS-201ENST00000232607 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
UMPS-201ENST00000232607 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
UMPS-201ENST00000232607 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
UMPS-201ENST00000232607 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
UMPS-201ENST00000232607 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
UMPS-201ENST00000232607 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
UMPS-201ENST00000232607 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
UMPS-201ENST00000232607 KMT2DO14686 5537 aa3.24□□□□□ -1.89
UMPS-201ENST00000232607 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
UMPS-201ENST00000232607 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
UMPS-201ENST00000232607 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
UMPS-201ENST00000232607 USH2AO75445 5202 aa3.13□□□□□ -1.91
UMPS-201ENST00000232607 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
UMPS-201ENST00000232607 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
UMPS-201ENST00000232607 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
UMPS-201ENST00000232607 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
UMPS-201ENST00000232607 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
UMPS-201ENST00000232607 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
UMPS-201ENST00000232607 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
UMPS-201ENST00000232607 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
UMPS-201ENST00000232607 MUC12Q9UKN1 5478 aa2.81□□□□□ -1.96
UMPS-201ENST00000232607 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.97
UMPS-201ENST00000232607 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.97
UMPS-201ENST00000232607 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
UMPS-201ENST00000232607 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
UMPS-201ENST00000232607 NEBP20929 6669 aa2.66□□□□□ -1.98
UMPS-201ENST00000232607 MDN1Q9NU22 5596 aa2.54□□□□□ -2
UMPS-201ENST00000232607 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
UMPS-201ENST00000232607 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
UMPS-201ENST00000232607 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
UMPS-201ENST00000232607 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
UMPS-201ENST00000232607 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
UMPS-201ENST00000232607 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
UMPS-201ENST00000232607 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
UMPS-201ENST00000232607 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
UMPS-201ENST00000232607 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
UMPS-201ENST00000232607 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
UMPS-201ENST00000232607 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
UMPS-201ENST00000232607 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
UMPS-201ENST00000232607 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.13
UMPS-201ENST00000232607 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
UMPS-201ENST00000232607 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
UMPS-201ENST00000232607 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
UMPS-201ENST00000232607 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
UMPS-201ENST00000232607 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.57□□□□□ -2.16
UMPS-201ENST00000232607 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
UMPS-201ENST00000232607 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
UMPS-201ENST00000232607 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms